UFO08740.5prime Sequence
1138 bp (1003 high quality bases) assembled on 2011-08-05
> UFO08740.5prime
CAGTCGACATGTCCCTGGTTTCAGATGAGGAGTGGGTGGAGTACAAGTCC
AAGTTCGACAAGAACTACGAGGCAGAGGAGGATCTGATGCGTCGTAGAAT
CTACGCCGAGTCCAAAGCCCGGATTGAGGAACACAATCGGAAGTTCGAGA
AGGGCGAAGTGACTTGGAAAATGGGAATTAATCATTTGGCTGATCTCACG
CCTGAGGAATTTGCCCAGCGTTGTGGCAAAAAGGTGCCGCCAAATGCAAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCA
TGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGAGTTCTGTGGTCATTACTGGATCTATCA
ACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTC
ATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCAT
CACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCG
CCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTC
CATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGG
CTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGG
TTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCG
GAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCT
CATGGAAACGGTGTACAAGGGTGAACACTATCCCATATCACCAGCTCACC
GTCTTTCATTGCATACGAAATTCCGGATGAGCATTCATCAGCGGCAGATG
TGAATAACGCCGGATAAACTTGTGCTTATTTTTCTTACGTCTTTAAAAGC
CGTAATAATCCAGCTGACGGTCTGTTATAGTACATTGAGCACTGACTGAA
TGCCTCAATGTTCTTACGATGCAATGGAATAATACACACGGGTGTATATC
CAGTGATTTTTTCCCATTAGCTTCCTTAACTCTGGAAG
UFO08740.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:43:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cer-RA | 497 | CG10460-RA | 111..347 | 9..245 | 1185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:43:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19396365..19396564 | 245..46 | 1000 | 100 | Minus |
| 2R | 25286936 | 2R | 19396624..19396662 | 47..9 | 195 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:43:24 has no hits.
UFO08740.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:50 Download gff for
UFO08740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cer-RA | 105..352 | 1..249 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:19:06 Download gff for
UFO08740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cer-RA | 103..350 | 1..249 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:45 Download gff for
UFO08740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cer-RA | 103..350 | 1..249 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:45 Download gff for
UFO08740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19396365..19396562 | 48..245 | 100 | <- | Minus |
| 2R | 19396624..19396668 | 1..47 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:19:06 Download gff for
UFO08740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15283870..15284067 | 48..245 | 100 | <- | Minus |
| arm_2R | 15284129..15284173 | 1..47 | 91 | | Minus |
