UFO08749.5prime Sequence
1088 bp (989 high quality bases) assembled on 2011-08-05
> UFO08749.5prime
CAGTCGACATGGGTCATAAAATGGGTGGCTTCTTGGAAAAACCAGAAACT
GAAAAGCAGGCTCAAGAGGGTCATGGGAATGGGCTGCGATACTGCGTAAG
TTCTATGCAAGGTTGGCGATTGGAAATGGAGGATAGCCACTCGGCTGCTT
GCCGGCTGAAGGATCCCTTCGCAACGTGGTCATATTTTGCGGTGTTCGAT
GGTCACGCTGGCAGTCAAATATCACTGCATTGCGCTGAACATCTAATGAG
TACTATATTGGAATCCGAATCTTTTTCGAAGCACAAATACGAGGCTGGCA
TACGAGAGGGCTTCCTGCAGTTGGATGAGGATATGAGGAAGCTGTATCAC
GACCAGCAAGGCGGCTCGACGGCCATTTGTGTTTTTGTATCACCGGACAA
AATATATCTGGTCAATTGTGGTGACTCGCTTGCAGTGATATCGCGAAATG
GAGCAGCTGTCATCAGTACAATTGATCACAAGCCGTTTTCTCCCAAAGAA
CAAGAACGCATTCAAAATGCCGGAGGCAGTGTAATGATTAAAAGGATAAA
TGGCACTCTGGCAGTTTCCCGGGCCTTCGGTGACTATGATTTCAAGAATG
ATGGCTCAAAGTCTCCTGTCGATCAGATGGTGTCTCCGGAACCTGATATA
ATAGTTTGCAATCGGTCCGAACACGATGAATTCATAGTTGTAGCCTGCGA
TGGCATTTGGGATGTGATGACTAGCAGCGAGGTTTGTGAATTTATTAGGT
CACGGCTTTTGGTGACCTATGACCTGCCGATGATTGTTAACAGCGTATTG
GATATTTGCCTGCATAAGGCAGCAGGACAATATGACACTGCTCCTCCTAC
TTTTGCCTGGAGCACCAAAGGTCGATATGGATGCAGTTAAGCCGAAAGGA
GTCTTGATCAAACTATGTGCAAATAACCAAGGAAGTGATTGAGAAGCACG
AAATACACGACTTTGAACACTATACGACTGATGAAAAGAATGGCCATTAA
CATCGAATCTACCACTGGCGGGTGTCTTTTATGCAAATATACATTATAGA
AGCAGCTTTCCACGAGAATTTCCGATACTTCCGCTGAA
UFO08749.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:44:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6036-RA | 1184 | CG6036-RA | 28..1119 | 9..1088 | 4990 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:44:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26344377..26345446 | 1068..9 | 4710 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:44:03 has no hits.
UFO08749.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:55 Download gff for
UFO08749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6036-RA | 21..1119 | 1..1088 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:23:04 Download gff for
UFO08749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6036-RA | 21..1119 | 1..1088 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:59 Download gff for
UFO08749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6036-RA | 21..1119 | 1..1088 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:59 Download gff for
UFO08749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26344355..26345451 | 1..1088 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:23:04 Download gff for
UFO08749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22170077..22171173 | 1..1088 | 97 | | Minus |
