UFO08752.5prime Sequence
1083 bp (996 high quality bases) assembled on 2011-08-05
> UFO08752.5prime
CAGTCGACATGACGGGTTCGTTCAGTGTGAAGCTCAAGTCCAAAAAAGGT
CAATTCATTGTCAACGACCTGAACGAGCATACGACGCTGGGGGAGCTGAA
AACGAAAATAGTCCAGGCCACCGACATCGAAGCGACGCAATTGCACGTCC
TAGTAGGCTATCCGCCCAAGCCATTGGATCTCTCGCAGCAGCAGGAGCAG
CGCGCCCTCAAGGCGGTCGGAATCAACAGCGGAGAGACGTTGATTGTGGA
GGAGAAGGCTGCCCCTGCTCCTGCTGCCCCTGTGCCTGGCGGCACCACCG
TGGAGGATGACGAGGCGCTGGCGCGTCGTCTGCAGGCCGAGGAGGAGGCA
CAGCTGCTGCAGGAAACCGCTGGCGGTCCAGTCGCCCAGGCAGCAGACTA
CCAGCTGCCAGTGGCGCCGACGGAAAGCGGACCGAATGGCGACTTTAATG
GCATACTGCTGAAGAAGGTGGTGCCGGCGGACAATTCGTGCCTCTTCACC
AGCATACGATTCGTGCTCAACGGGAAGGTGGACAACGAGGGCAGCGAAAT
GATGCGTCACATCATTGCGCAGGAGGTGGCCGCCGATCCGCAGAGCTACA
ACGACGCCGTGCTGGGCAAATCGAATGCCGAGTACTGCGCCTGGATACAG
AAGGCGGATTCGTGGGGCGGCGCCATCGAAGTGTCCATACTGTCCAACTA
CTATGGCATTGAGATCGATGTGGTGGACATACAAAACGCCATTATCAATC
GCTTTGGCGAGGACAAGAACTTTGGACTGCGTGTCTTCCTGCTCTTCGAT
GGCATCCACTACGATCCGCTGTACATGGAGACATCGCCGAGTGCTGCCCC
GGCCACCATCTTCCCGGTGGAAGAGCTGGGCGTCTATCAGCAGGCCGAGC
AGTTGGGCCACGAGGCGCAGTCCTCCCCGCAATACACCAATGTGGATAAA
TTCACGCTGCGCTGCATGCAGTGCGATGTCAGCTGGTCGGCAGGTGCAGA
CCCAGGAGCATGCAGCAACGGAACCAAGAACTTTGGAGAGAATGCAGGCT
TTCTGACCATCCGTTGGCGCCGCGGTCCAGTTA
UFO08752.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:44:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4603-RC | 1394 | CG4603-RC | 115..1153 | 9..1041 | 4930 | 98.6 | Plus |
| CG4603-RB | 1451 | CG4603-RB | 172..1210 | 9..1041 | 4930 | 98.6 | Plus |
| CG4603-RA | 1451 | CG4603-RA | 172..1210 | 9..1041 | 4930 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:44:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5134391..5135397 | 9..1013 | 4830 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:44:13 has no hits.
UFO08752.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:57 Download gff for
UFO08752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4603-RA | 171..1209 | 9..1041 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:24:01 Download gff for
UFO08752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4603-RA | 172..1210 | 9..1041 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:02 Download gff for
UFO08752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4603-RA | 172..1210 | 9..1041 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:02 Download gff for
UFO08752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5134391..5135427 | 9..1039 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:24:01 Download gff for
UFO08752.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5127491..5128527 | 9..1039 | 98 | -> | Plus |
