UFO08754.5prime Sequence
1121 bp (1015 high quality bases) assembled on 2011-08-05
> UFO08754.5prime
CAGTCGACATGGCAAGCAATCCGAAGAAGTCCCTCCACCAGGCGATCCAG
GCCGAGTTTGGTCTCCAGCCCACCAGCGATTTGTCCAAATTGAGCAGTAT
AAGTGGCACGAGCCCAGAAGCGATGCCAAAATTCACAATTCCGCAGCTCA
AAATTCCACAGCTTAGAATTCCACAATTGCAGCTGCAGACGAATGCGGAT
GCCGCTGCCGAGCAGGAATACCGCCGAGAGGCGGAGGCACACAATCAAAT
GCTACTCAATGAGATCCAGTTGAGGCAACGGCAGCGATCGGAGGGCGAAA
ACAAGCCGCAATCAATGGGATTTGTGTTACCCCAACTGGTCGCGATGCCC
AAGGAGCCCCTGAACATACCCCTGCTGACAAGGTTGGAGAGCGGCATGAA
GAAGCTGGATATAGGCGATGGGACAAAGGTGAATACAGCCACGTCAGCAC
CCCCACTCATTGACCTCACGTCCACGATTATCGCCAGGCATAAAGGCGCA
CCGCCCAAGGAGCTGGCCAGCAAGGCGCGCCAGTTGACCAATTGTGAGCC
TTTTGCCATACCCTTCATTGCCTGCGATCGCGGAAGAAGGAGCACGACCG
GTGTAACTCTCTTGGCCAGCAAAAGATCCATCAACTACGACGAGGACGTG
CTGGCCGATCGGTCACCAGCGAATAGCGACTACCGGGAGCAACCGGGACC
CATTGGGCTCATGCTGGACGAAATGGTGGGCTATCCGGAGCCGAGAAAGC
CCCGTCTAGTGTACGCCGTCACTCCGCTGGAACGGCAGCACCTGCGAATG
TGCCAGTATAAAGGATTACGGCATCCAGGTGAAGAGATTCCGCTTTGATA
CTCCCTCGCCGGATGAGCTCGTCAAGCAGCGCTGCAGAAGTCCTGGCGCT
TCTCCCGCACTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATATCACACTAGCCTA
GAGATCCTGTCATGACTGTGCTTGATTCCCCACCATAAAAACGCCCGCCG
CACCGAGCGGTTCTGAACAAATTCAGAATGGGGAGTTCTGAGGTCATTTA
CTGGATCTTATTCACGGATTC
UFO08754.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:44:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17982-RB | 1286 | CG17982-RB | 315..1217 | 9..911 | 4470 | 99.8 | Plus |
| CG17982-RA | 1056 | CG17982-RA | 85..987 | 9..911 | 4470 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:44:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8142619..8143521 | 911..9 | 4420 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:44:23 has no hits.
UFO08754.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:58 Download gff for
UFO08754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17982-RA | 85..992 | 9..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:25:07 Download gff for
UFO08754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17982-RA | 85..992 | 9..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:05 Download gff for
UFO08754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17982-RA | 85..992 | 9..918 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:05 Download gff for
UFO08754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8142616..8143521 | 9..914 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:25:07 Download gff for
UFO08754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8036649..8037554 | 9..914 | 99 | | Minus |
