UFO08755.5prime Sequence
1110 bp (989 high quality bases) assembled on 2011-08-05
> UFO08755.5prime
CAGTCGACATGCCACTTAAAGGCATCAGGGTACTCGAATTCGTGGGTTTA
GCACCAGGACCGTTTTGTGGGAAGATTCTAACCGACTTTGGGGCCACAGT
CACCCGCATCGACAAGGTGATGGAAAACCCTTTGGATGTACTGCAGCAGG
GAAAGCGCACACTTTGCCTGGATCTGAAGAACCCGAAAGGTCAGCAAGCG
GTGCAAAGGCTGGTCAAGAAGTGCGATGTGCTCATCGAACCTTTTCGACC
GGGAGTAATGGAGAAACTAAATCTGGGTCCCACCGACTTGTGCACAGCCA
ATCCCCGCCTGATTTATGCCCGCCTCACCGGCTTTGGCCAGCATGGAAGA
CTGGCGCAACGGGCGGGACACGACATCAACTACGCGGCCTTATCGGGAGT
ACTTTCCATGCTGGGCAGGCGCCACGAAAAGGTCACTGCACCCATTAATA
TTCTGGCCGATTTCGCTGGCGGCAGTTTGATGTGCGCTCTGGGAATTTGC
CTTGCCCTCTTGGAGCGCCACAGGTCGGGAAAAGGCCAAGTAGTGGATGC
CTCGATGGTCGAGGGAGCTGCCTATGTGGCCAGTTGGCTGTTTATGTCCA
GGAATCTGGTTATTTGGGGGAGGGAGCGCGGTGACAACCTCGTCGATGGT
GGATCATTCTTTTACGACACGTACGAAACCAAAGACGGTCGCTACATGTC
CGTGGGCGCCCTGAACCGCAGTTCTTTGAGATGCTAAAACAGCGCTTGAA
ACTGCCCGAAGATGTCAGTCAGTTTGGCGAGGAGCATCAGTTCGAGGAAG
AAAGCTTTTGACTGAGGCTTTCCTCTCCAAGACCCAAGCTGAATGGTCGC
AAATATTTGAGGATGTCGACGCCTGTGTCTATCCCGTTCTGGATTACCGC
GAGGTTCACAGACACGATCACATATACAGAGGAATTCGTCGAGGTGACTG
AGATAAGCGACGCCCACGTCCTGCCTCCAGTCCTAGCAGACCCCGGGAAA
GTTGCCAGCACTGATGGTGCCCAGGTGGAGTGGATGGACGACTAGATCTA
GCCGACGGTTAGATGGCTCGACTCGAATATCTTCCCCTTCGAAGCAAGCT
GCAGCCTTCT
UFO08755.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:44:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9319-RB | 1335 | CG9319-RB | 146..1197 | 9..1049 | 4860 | 98.3 | Plus |
| CG9319-RA | 1261 | CG9319-RA | 72..1123 | 9..1049 | 4860 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:44:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20751081..20752017 | 1041..115 | 4010 | 97.9 | Minus |
| 2L | 23513712 | 2L | 20752087..20752196 | 118..9 | 550 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:44:28 has no hits.
UFO08755.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:58 Download gff for
UFO08755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9319-RA | 145..1211 | 9..1060 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:25:44 Download gff for
UFO08755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9319-RA | 72..1138 | 9..1060 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:08 Download gff for
UFO08755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9319-RA | 72..1138 | 9..1060 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:08 Download gff for
UFO08755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20751042..20752015 | 117..1072 | 97 | <- | Minus |
| 2L | 20752089..20752196 | 9..116 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:25:44 Download gff for
UFO08755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20751042..20752015 | 117..1072 | 97 | <- | Minus |
| arm_2L | 20752089..20752196 | 9..116 | 100 | | Minus |
