UFO08758.5prime Sequence
1142 bp (1021 high quality bases) assembled on 2011-08-05
> UFO08758.5prime
CAGTCGACATGAATAGCCTTAGCCAGAGGTCGCCGTACAGCCAGATCGGG
ATGGGAGCTGCCGGTGGTTTTCTCACCGGCTTCGTGCTCCTCAAGGCGAG
TAAGATTATGGCCGTGGCCGCTGGCGGTACCATTCTGGCGCTCGAGCTGG
CATGGCAGGCGGGACTGGTCCAGCTGGATGTGCTCAAGACATTCTCACAG
CTGGAACAGGATCAGTCCCGGGGGCAGCTAGAGGTCAGAGAAATATCCCT
GGAGCCAGTGAATCTTAACCGCGTTCAGGAACTTGGGGATAAAGCCAGGA
AGGCGTGTGCAACCAGCGGTCGTCTATGTGTGGCCTTCTTGGGCGGCTTT
CTACTCGGCTTTGGATGGGCTGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
ACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCA
ATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAG
TTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATA
TCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATT
AAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAA
TCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATG
GTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAA
ACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAA
TAAACCCTTTAGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTT
GCGAATATATGTGTAGAAACTGCCGGAATCGTCGTGTATTCACTCAGAGC
GATGAAAACGTTTCAGTTTGCTCATGGAACGTGTAACAGGTGACACTATC
CCATATCACAGCTCACGTCTTCATGCATACGAATCGGATGAACATCATCA
GCGCAGAATGGAATAAGGCGATAACTTGTGCTATTTCCCTACGTCTAAGC
CGTAATTCCAGCTGACGGCCTGGTTTAAGATTCATGGACAAC
UFO08758.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:43:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12511-RB | 585 | CG12511-RB | 146..509 | 8..371 | 1820 | 100 | Plus |
| CG12511-RD | 918 | CG12511-RD | 203..566 | 8..371 | 1820 | 100 | Plus |
| CG12511-RC | 589 | CG12511-RC | 150..513 | 8..371 | 1820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:43:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5678784..5679147 | 8..371 | 1820 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:43:49 has no hits.
UFO08758.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:53 Download gff for
UFO08758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12511-RB | 84..457 | 1..376 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:21:34 Download gff for
UFO08758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12511-RC | 143..517 | 1..376 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:53 Download gff for
UFO08758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12511-RC | 143..517 | 1..376 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:53 Download gff for
UFO08758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5678778..5679147 | 1..371 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:21:34 Download gff for
UFO08758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5678778..5679147 | 1..371 | 98 | == | Plus |
