UFO08759.5prime Sequence
930 bp (929 high quality bases) assembled on 2011-08-05
> UFO08759.5prime
CAGTCGACATGTTCGGATTGGGACAACTTTTGGCGGTAGCCCTTCTTCTC
ATTTTCTTGCCATCGGGCTTGAGAGGCGCAACGACACGAACACACTTGGA
CACGAAGGCCATCCGTCCGAGATTCAATGCGGATCCCGGCAGGATTATCA
ATGGAACAGAGGCCTCTCTGGGCGCAACTAGGCATCAGGTGGGCATTCGC
AAGGCTCTCAACGATGGCTACTTCTTTGGAACCGGGCACCTTTGCGGAGG
ATCTCTCATCCGGCCGGGATGGGTACTCACCGCCGCCCATTGCTTTGTGG
ATCAGATTATTTACGACGGCACTTTCGTGCCCAAGGAGGAGTTCATCGTG
GTGATGGGTAACCTGGATCGCTACAATCGCACCAACACGCTAACATTCAC
GATCGAAGAGCGCATAATGCAGCTGGATAAGTTCGACCTTTCCACCTACG
ACAAGGACATCGCCCTGCTGATGCTGAATGGTACTGTACCCACTGGACAT
CCGACCATTCGTCCAATTGCCCTCAATCGGTTTGCCATACCGGAGGGCGT
CGTCTGCCAGGTGACGGGCTGGGGCAATACGGAGGATGGCTATGTCTCCG
ACATCCTGATGACCGTCGATGTGCCGATGATCAGCGAGGAGCATTGCATC
AATGACAGCGACCTGGGCCACCTGATTCAGCCGGGAATGATATGTGCCGG
TTATTTGGAGGTGGGAGAAAAGGATGCCTGCGCCGGCGATTCCGGCGGAC
CATTGGTGTGCCAAAGTGAATTGGCCGGCGTGGTTTCCTGGGGCATTCAA
TGTGCCCTGCCCAGATTACCGGGTGTGTACACAGAGGTGTCCTACTACTA
CGACTGGATACTACAGAATATGGGCGAGAATGGTGAAGGAAGTGGTGAAG
AAAGTGGTGAGGGAAGTGGTTGAGGGAAGT
UFO08759.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:43:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6048-RA | 1158 | CG6048-RA | 34..954 | 9..930 | 4585 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:43:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5953215..5953833 | 302..920 | 3095 | 100 | Plus |
| X | 23542271 | X | 5952730..5952957 | 74..301 | 1140 | 100 | Plus |
| X | 23542271 | X | 5952598..5952665 | 9..76 | 340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:43:54 has no hits.
UFO08759.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:54 Download gff for
UFO08759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6048-RA | 30..954 | 1..930 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:22:03 Download gff for
UFO08759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6048-RA | 30..954 | 1..930 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:55 Download gff for
UFO08759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6048-RA | 30..954 | 1..930 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:55 Download gff for
UFO08759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5952594..5952664 | 1..75 | 94 | -> | Plus |
| X | 5952732..5952957 | 76..301 | 100 | -> | Plus |
| X | 5953215..5953842 | 302..930 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:22:03 Download gff for
UFO08759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5846765..5846990 | 76..301 | 100 | -> | Plus |
| arm_X | 5846627..5846697 | 1..75 | 94 | -> | Plus |
| arm_X | 5847248..5847875 | 302..930 | 99 | | Plus |
