UFO08760.5prime Sequence
1106 bp (999 high quality bases) assembled on 2011-08-05
> UFO08760.5prime
CAGTCGACATGGCTCGGTTGATGTTGCGAATGAAAGTATCCATGATACTG
ACCGGTGTATTTTTTACGCTTTACTTTGGGCTCCAGCCAGTAACAGAGTG
GTTTGAAAGAAAGGATCTAGTGACTGCACCCGAGGAAGTAGTCTTTGTGA
ACACCTCCGTGTGTCATGTAAGTGGCCAATGGAAGCCGACGGCGTTTTAC
TCTGCGATTGAGCCGGTCAACAAGTTGCGGTGTCGGATGACCCAACTACT
TACTGCAATAACTCAAGACGGTAGCAATTTTCTGGAGGCCAAAAGGATCT
CAGAGGACTTGAGTTGTAGGTATTGGCTAAAATCTGGACACACCCGCAAC
CATTCAGGGCACTACACAGCGTATGGACACTTCGATCTGAAAAGGGGTGC
GACCAGAAAAATTAAGATCGGCACTGGAGAGCAGATAGTTCGCATTAGGT
GCTCGGACAAGTTTAAAGCAAGCAAATACCATGACGTGCTTTATTTTTTG
TCTCCGCCCGATCCCAAATTGATGTCGACAGAGAGTTCTGAGAAATTGTC
TGTGATGGTCTTGGGCATTGACTCAGTTTCCCACATGCATTTTGTGCGAT
ATTTTCCCCTCGTGATGGCCTTTTTAGAAAACCACCCGCACACGAAATTC
TTCGGCTACAGTCGTGTGGGCCTGGATGCAAATGCCAATTTAGTCCCTTT
TCTAGGTGGCAAAAGCAGTCGAGCAGCTGGTTCAGACATTCTCTCCGACG
AGAAGGCGTGGCTGTGGGACAGCTTCAAGATGGAAGGCTACAGCACTGCC
TACGGTGAGGATAACGCCAAAGGGATCCTCTCCAATAGGAACGGGGATAA
AGAGCTTCCCAAAAGTCCAGTTGATTTTGATTTGACTCCTGTAATTGTCG
AGATGAATAATCACCCCGCGCTATAGCATCGATCTGAAGGAGATGATCCA
CTGCACGGCAGCCGTAAATTCCAGAATGTTCTCAGGACTTTGTACCCCCA
CTGGTTACCCTATATGCCAGATGCCATTTTCTCGTTTTCTGGCAGTCGCA
AGGGTTCAGGGTCTATGAATACGCCTGGAACTGATCTTCCTATGATGCAT
TGGAGA
UFO08760.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:44:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1428-RA | 2031 | CG1428-RA | 65..1159 | 9..1093 | 4945 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:43:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21906353..21907398 | 9..1050 | 4725 | 98.3 | Plus |
Blast to na_te.dros performed 2014-11-26 23:43:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| hobo | 2959 | hobo DMHFL1 2959bp Derived from M69216 (g157606) (Rel. 41, Last updated, Version 3). | 30..116 | 669..582 | 113 | 60.2 | Minus |
UFO08760.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:54 Download gff for
UFO08760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1428-RA | 59..1159 | 1..1093 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:22:32 Download gff for
UFO08760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1428-RA | 59..1159 | 1..1093 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:58 Download gff for
UFO08760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1428-RA | 59..1159 | 1..1093 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:58 Download gff for
UFO08760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21906347..21907447 | 1..1093 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:22:32 Download gff for
UFO08760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21906347..21907447 | 1..1093 | 97 | | Plus |
