UFO08761.5prime Sequence
1118 bp (1020 high quality bases) assembled on 2011-08-05
> UFO08761.5prime
CAGTCGACATGGAGGAAGAACCCTTAGTTTCCCCTTCGGTTCCAATTCGA
AAGCCATGTGGTACGTTTAAGCCTCCGGCCATCTACCAGAAGCTGATGAT
TGACAATCTGACTGTCATTCGACCGCCCATCCTGAAGATCTTCTACTGGG
AGAGCTTTGAAATAACGGGCTTGAATCGGAAGCTGCGTTCGAACCGCATA
GAGCATGAGCATACATTCAAGATACCTATTCGCCAGATCCACAGTCATCC
CCTGAAAATGGTCTTCTGGATCCGTAATCTATCGGCCGCGAACGCCAAGT
TGACTCTAAAGCGTATCCAAAACTGTCAATGCCAGCCGCAGCAGACCCAA
GTCGGATTCAATCAGTTCCGCCAGCTCTTCCACTGCCCACATCGCAGACT
GCTCCACATCAGCCAGGAGATCCTGTCTATCAATCCTGATGAGGTGGTGG
CCCTCACCGTAACGGCCTATTTCTTCTTGTACGGCGAACACCTGCTCACC
TACGAAGTTCACACTGAAGACAATCGCAAGTTTCTGTGGCATTTTCATCT
GGAGATCTCGTCCTTTGACCCCGAAAAGTGTCTACTCACTAAAGAGCTGC
TGCCGGTAAACATAAAAAGCTTTTACCATATAACGCAGCCGTTGTGGGTC
CAAAATATCACGATGTCACACTTGTCATTCTCGTTTGCTTCAAGGGATCG
TGGCCTCAAGCTGCTCAATATGAATCTCACCGTGCCTCGACAGAGTGTGT
GGCCCCTCCTGGTGGACTATCGACCCTTGGACTACGAAAATGAGGCGGAA
ATTGTCTTAACATATGAAAATACCAAGGCTCGCTACAAAATTAAAGCACG
AGGCGTGCTGACTGACGAGAAGGAGCAGACGGACATGCCCTTGAAGGATC
GGGAATGCGTCGATTTCCTGCACGTCATCTACCCTAATAGAGTAACTTTG
AAATCTGCCTGGGGTGAAGATCGGACGCAGCTCGTCATGTCCATACTACG
GACAGCAGTGCATGGAGTTCGGTGGCAGAGCTAAAATAATCACGATTTTT
TTGGCGGTGTTGTTTCCATTCCGGCCTATTTCCGCTTTAAGGCCACTCCC
TCGAGCCTGTGGCGGGAT
UFO08761.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:44:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17005-RE | 2182 | CG17005-RE | 57..1152 | 9..1104 | 4965 | 97.5 | Plus |
| CG17005-RB | 1917 | CG17005-RB | 57..1152 | 9..1104 | 4965 | 97.5 | Plus |
| CG17005-RC | 1969 | CG17005-RC | 269..1204 | 169..1104 | 4165 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:44:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9328012..9328354 | 169..511 | 1700 | 99.7 | Plus |
| 2L | 23513712 | 2L | 9328413..9328696 | 512..795 | 1390 | 99.3 | Plus |
| 2L | 23513712 | 2L | 9328752..9328996 | 793..1034 | 905 | 95.9 | Plus |
| 2L | 23513712 | 2L | 9327800..9327960 | 9..169 | 805 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:44:32 has no hits.
UFO08761.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:59 Download gff for
UFO08761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17005-RB | 48..1118 | 1..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:26:16 Download gff for
UFO08761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17005-RB | 48..1118 | 1..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:09 Download gff for
UFO08761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17005-RB | 48..1118 | 1..1069 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:09 Download gff for
UFO08761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9328754..9328992 | 795..1030 | 96 | -> | Plus |
| 2L | 9328013..9328354 | 170..511 | 99 | -> | Plus |
| 2L | 9328413..9328695 | 512..794 | 99 | -> | Plus |
| 2L | 9327791..9327960 | 1..169 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:26:16 Download gff for
UFO08761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9327791..9327960 | 1..169 | 97 | -> | Plus |
| arm_2L | 9328013..9328354 | 170..511 | 99 | -> | Plus |
| arm_2L | 9328413..9328695 | 512..794 | 99 | -> | Plus |
| arm_2L | 9328754..9328992 | 795..1030 | 96 | -> | Plus |
