UFO08762.5prime Sequence
1135 bp (1013 high quality bases) assembled on 2011-08-05
> UFO08762.5prime
CAGTCGACATGCTTCGTTATACGGCACGGATTTTGAATGGGATTTACCCA
CTTATGCCAAGGCAAGTATTAAAACGTTCCGCACACCAGGTGCCCGAGAA
GCTGAAAAAAGTTGAGACGGACAAGGACCCGGAATTCTCGGAAATGGTTC
TTTATTATTATCACAAGGCCGCGCAGACTATGGAGCCTGCATTGCTCAAG
GAAATGGAAAAGTATCCGCATATGAAGCCGGAGGAGCGTCAGGCTCGTGT
CACCGCTATACTGAATCTGCTTGGGAGCGTCTCCACCTCGGTGGAGGTTA
ATTTTCCCATTGTCCGCAAAAACGGCACCTACGAGATCATCAGCGGTTAT
CGTTCGCATCATGTACGCCATCGATTGCCTCTCAAGGGCGGAATCCGATA
CGCTCTGGACGTGAACGAGAGCGAAGTTAAAGCCCTTGCCGCCATTATGA
CGTTCAAGTGCGCTTGCGTGAATGTACCTTATGGTGGATCTAAGGGCGGC
ATTTGTATCGATCCCAAGAAGTATACAGTGGATGAGCTGCAGACGATCAC
ACGGCGATACACGATGGAGTTGCTCAAGCGTAATATGATTGGTCCCGGCA
TCGATGTACCGGCGCCCGATGTGAACACTGGTCCGCGTGAGATGAGCTGG
ATTGTTGATCAGTACCAGAAGACATTTGGCTACAAGGATATCAATTCATC
GGCTATTGTCACCGGGAAGCCCGTACACAACGGCGGCATTAATGGTCGAC
ATTCGGCCACGGGCAGAGGCGTTTGGAAGGCGGGCGATCTCTTTCTGAAG
GATAAGGAATGGATGGATCTGCTCAAGTGGAAAGACGGGATGGAAGGACA
AGACGGTCATAGTGCAGGATTTGGCAATGTGGGCTCCTTTGCCGCTAAGT
ATGTGCACGAGGCGGGCGCCAAAGTCATCGGAATAAAAGAGTTTGATGTT
TCTCTGGTATACGACGGCATAGATATAATGATCTTTTGAATACACCTGAG
AAAAGAAGACTATTTAAAGGATATCCAAAGCTCAAGGAGTCTAAGGAGGA
CTTGTGTAGCGAAACGAAATCCTTTATGCCGTGTGTCACCAAGTGACTAT
AACTCTACTCGGACATTGTCAGACTCAGGCAGCTG
UFO08762.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:44:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4434-RA | 1795 | CG4434-RA | 92..1180 | 9..1090 | 5020 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:44:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23289092..23289660 | 958..390 | 2750 | 99.6 | Minus |
| 3R | 32079331 | 3R | 23289716..23290098 | 391..9 | 1915 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:44:37 has no hits.
UFO08762.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:00 Download gff for
UFO08762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4434-RA | 87..1180 | 4..1090 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:26:46 Download gff for
UFO08762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4434-RA | 87..1180 | 4..1090 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:10 Download gff for
UFO08762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4434-RA | 87..1180 | 4..1090 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:10 Download gff for
UFO08762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23289067..23289659 | 391..979 | 98 | <- | Minus |
| 3R | 23289717..23290103 | 4..390 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:26:46 Download gff for
UFO08762.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19114789..19115381 | 391..979 | 98 | <- | Minus |
| arm_3R | 19115439..19115825 | 4..390 | 99 | | Minus |
