UFO08764.5prime Sequence
1110 bp (1022 high quality bases) assembled on 2011-08-05
> UFO08764.5prime
CAGTCGACATGTTTTTGGAAGTCCTGTTCGCTGCTCCACTTGTGATTTTC
ATTTTTCGCAAGTTATGGGCTCATTTGAATAGGACCTATTTCATCCTGAG
TCTTTGCAAACGAATTCGAACAGAAGACGGTAGTTTGTTGGAAAGTAAAA
TTTACGTAGCGCCGAGCAAAACCCGATTTGGAAACAACTTTGACCTCGTA
AACTTTACATCTGAAAGCATATTTAACTTCATGAGAGATGCATCTGCAAA
AGCGAAAGGTCGAAACTATCTATGGTATTTTTTCCATGCACCCATGTATA
ATATTGTTCGGGCCGAGGAAGCCGAGGAGATATTGCAAAGTTCCAAGCTT
ATTACCAAAAATATGATCTACGAGCTTTTGAAACCGTTTTTGGGCGAAGG
ACTGCTGATTAGCACAGATCAGAAATGGCACTCTAGAAGAAAAGCCCTGA
CTCCTGCTTTTCACTTTAAGGTGCTGCAATCTTTTCTGATCATATTCAAA
GAAGAGTGCAATAAACTTGTGAAAGTCCTGCATCAAAGTGTGAATATGGA
GTTGGAGCTCAATCAGGTTATTCCTCAGTTTACGCTAAACAATGTTTGCG
AAACCGCACTGGGAGTAAAACTTGATGACTTGTCGGAGGGTATTCGATAT
CGCCAGTCGATTCACGCCATTGAAGAAGTTATGCAGCAGCGCTTATGCAA
TCCGTTCTTCTATAACATTGTGTATTTCTTTCTATTCGGCGACTATCGAA
AGCAGGTGAATAATTTGAAGATAGCCCACGAGTTTTCCAGTAACATCATA
GAGAAAAGGAGGAGCCTCTTCAAAAGCAACCAGCTTGGTCAAGAGGATGA
ATTTGGCAAGAAGCAGCGATACGCCATGCTTGATACCCTGTTAGCAGCCG
AAGCAGATGGTCAGATCGATCATCAGGTATCTGCGATGAGTCATACCCTT
TATGTTCGAGGGATACGATACTACGTCCACTGTCTATATTACCTATGATG
CTGCACTCCACGAGATGTCAGAGATGCTATGGAGGAGAATCAAATACTCC
GATGAATAGCGACGATTTCAGTGTGGTTCAGTATGACCTGGTCTATATGA
ATGGTTGATC
UFO08764.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:44:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4ac2-RB | 1709 | CG17970-RB | 41..1159 | 9..1110 | 4955 | 97.3 | Plus |
| Cyp4ac1-RA | 1666 | CG14032-RA | 183..1050 | 161..1019 | 930 | 75.4 | Plus |
| Cyp4ac3-RA | 1606 | CG14031-RA | 142..674 | 105..637 | 395 | 72.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:44:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5267378..5267760 | 600..980 | 1770 | 98.7 | Plus |
| 2L | 23513712 | 2L | 5266432..5266636 | 9..213 | 1025 | 100 | Plus |
| 2L | 23513712 | 2L | 5266694..5266898 | 213..417 | 1025 | 100 | Plus |
| 2L | 23513712 | 2L | 5267095..5267195 | 500..600 | 505 | 100 | Plus |
| 2L | 23513712 | 2L | 5265101..5265237 | 846..980 | 480 | 93.4 | Plus |
| 2L | 23513712 | 2L | 5266956..5267039 | 416..499 | 420 | 100 | Plus |
| 2L | 23513712 | 2L | 5269594..5269733 | 834..971 | 300 | 84.3 | Plus |
| 2L | 23513712 | 2L | 5264349..5264497 | 267..415 | 250 | 77.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:44:46 has no hits.
UFO08764.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:01 Download gff for
UFO08764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ac2-RB | 34..1159 | 1..1110 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:27:47 Download gff for
UFO08764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ac2-RB | 34..1159 | 1..1110 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:14 Download gff for
UFO08764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ac2-RB | 34..1159 | 1..1110 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:14 Download gff for
UFO08764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5266425..5266636 | 1..213 | 98 | -> | Plus |
| 2L | 5266695..5266898 | 214..417 | 100 | -> | Plus |
| 2L | 5266958..5267039 | 418..499 | 100 | -> | Plus |
| 2L | 5267095..5267195 | 500..600 | 100 | -> | Plus |
| 2L | 5267379..5267905 | 601..1110 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:27:47 Download gff for
UFO08764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5266425..5266636 | 1..213 | 98 | -> | Plus |
| arm_2L | 5266695..5266898 | 214..417 | 100 | -> | Plus |
| arm_2L | 5266958..5267039 | 418..499 | 100 | -> | Plus |
| arm_2L | 5267095..5267195 | 500..600 | 100 | -> | Plus |
| arm_2L | 5267379..5267905 | 601..1110 | 94 | | Plus |
