UFO08766.5prime Sequence
1120 bp (1002 high quality bases) assembled on 2011-08-05
> UFO08766.5prime
CAGTCGACATGTCGGAAAAAGATCTGGATGCGATTATTTTGGAGACCCAA
AAGGTTTTGGGCAAGTACATCAAAAAGCCACCGCTCACGGAGAAGCTGCT
GAAGAAGCCGCCATTCCGATTTCTAATGGATGTCTTTAGTAACTTTATCA
AGCAAAGTGGCACATTTGATGGATTATACACGCCGGAAGAGCAGATGTTC
GAGAACATAACCAGTCGGGAGGATAAGATTCGATTTCTGCAGAAGATGAT
CGATGCAACCAAACTAACAACCAAACTGGATCTCAAAGTACGCACTTCAA
AAATAGTTGCTGGCCAGGAACCGGAGCTCACCAATGAGCTCCTCCAGGCG
ATGGCCAGTGTTGCGGAAAAGAACTTGGAGTGGGACAGCATTGTGGATCA
GGTGGTGATTTCCCACAGCAAAACACCACTTACGCTTACCAAGCCACCGA
AGGAAACTAAAAATTCAAGCAAAAATCCCTCACCCGCCGGCAAGGATGAG
GATGCAAAGCGACGCAAGGAGAAACGTATATCGCCTCAAGAGCAGAAGCT
GCGCAAGGTCAAAGAACAGGTGTCCCGTTCTACTCCCCCCACCGAGAAGG
ATAAAGCATCCCAGAAGAAGTCCAAGGCACCCAAGGATGAGACGAAGTTA
AGTCGACAAAACTCGAAGCAAAAGAGTCCGTCACCAGTTAAGCAGAAGTC
CAAAGCCAAACTGCAGCCTTCAACAGAGAGCGATAATCTTAGCCAGTCTA
TGTCGCCAGTGGAAGAAGGATCAACCAAGCCTGCTGCAAGCGAAAGTGCT
CCAAGCAAACCAGAGCCGGAAATGGTTCCTCCATTAAAAGAGAAGGAGGC
AGTGGTGAGACCTGTCCAGGAACTCCAACTGCTCCACCAGCTGAGCCTGA
GAGTCGCAATCCTCTAGCAGAGTCGCCGTTCTAGTGGAGCCACAGGCACC
GGAACCTATCCCATTCCCAATGAGAGCCATCCCAGCCAGCGTGCAGTCGT
CAGATCCAGCTCCTCCACCGAGACAACAGCGGCGACGGAACGGGAGGTCC
CTCCCCAGAGAGACCTCTAGGAGTGATTCACGCCAGACCTCACTAGACCT
CATCGTGACGCCTCGGCAGT
UFO08766.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:38:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3259-RA | 1843 | CG3259-RA | 29..1142 | 9..1101 | 4930 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:38:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14302832..14303396 | 262..826 | 2810 | 99.8 | Plus |
| 3R | 32079331 | 3R | 14302456..14302590 | 9..143 | 675 | 100 | Plus |
| 3R | 32079331 | 3R | 14302655..14302772 | 144..261 | 590 | 100 | Plus |
| 3R | 32079331 | 3R | 14303459..14303647 | 824..1004 | 545 | 95.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:38:41 has no hits.
UFO08766.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:09 Download gff for
UFO08766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3259-RA | 1..1057 | 9..1054 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:49:05 Download gff for
UFO08766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3259-RA | 29..1085 | 9..1054 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:44:49 Download gff for
UFO08766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3259-RA | 29..1085 | 9..1054 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:44:49 Download gff for
UFO08766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14302456..14302590 | 9..143 | 100 | -> | Plus |
| 3R | 14302655..14302772 | 144..261 | 100 | -> | Plus |
| 3R | 14302832..14303394 | 262..824 | 99 | -> | Plus |
| 3R | 14303460..14303727 | 825..1076 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:49:05 Download gff for
UFO08766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10128178..10128312 | 9..143 | 100 | -> | Plus |
| arm_3R | 10128377..10128494 | 144..261 | 100 | -> | Plus |
| arm_3R | 10128554..10129116 | 262..824 | 99 | -> | Plus |
| arm_3R | 10129182..10129449 | 825..1076 | 91 | | Plus |
