UFO08775.5prime Sequence
1104 bp (1017 high quality bases) assembled on 2011-08-05
> UFO08775.5prime
CAGTCGACATGAGCGCGCCGAGCAACAAAATGTCGGCCACCGATCAGATG
CGAGCAATGCTGGACCAGCTTATGGGTACCACACGGAATGGCGACGAGCG
CCAACTGAAATTCTCGGACCCCAGGGTCTGCAAGTCCTTTCTGCTCGACT
GCTGTCCGCACGACATCCTGGCGTCCACGCGCATGGATCTCGGTGAGTGT
CCCAAAGTGCATGACCTGGCTTTCCGCGCAGATTACGAAAGTGCCGCCAA
GACGCGCGACTACTACTACGACATTGAGGCCATGGAACACCTGCAGGCCT
TTATTGCCGACTGCGATCGACGCACCGACTCCGCCAAGCAAAGGTTGAAA
GAGACCCAGGAAGAGCTGACCGCCGAGGTGGCTGAGAAGGCCAATGCTGT
CCATGGCCTCGCCGAGGAGATTGGCAATAAGTTGGCCAAGGCCGAGGCCC
TGGGCGAGGCCGGCGAAGTGGAGGACAGCATGGAGCTGATGAAGGAGATC
GAGGAGCTGCGTGCTAAGAAGATCAAGGCCGAGCACGAGTACCGCACATC
TATGCCCGCATCCACCTACCAGCAGCAAAAGTTGCGCGTCTGCGAGGTAT
GCTCCGCCTACCTCGGGATTCACGACAATGACATACGTCTGGCGGACCAC
TTTGGTGGTAAGTTACATCTCGGATTCCTCACTATCAGAGAAAAGCTGAT
CGAACTGGAGAAGACGGCGGCGCCGCGGAAGGCGGAGCTCAAGCGGACGG
GTAAGATGACGGACCGCGAGGACGAGGGACGCGGACGCAATCGCTACTTT
GTAGGTGGTCGTGAACTGGACCGCCGCTCTCGCGTACATCGTTCCCGCTC
CAGAGAACGACAGCGCAACCGGGATGGGGACCGCGAACGCCCCAACAACG
GACGCGGTCCTGAGAGAAGGGAGTGAGCGACCCAGGAAGCGGCAGATGGT
CCGGAGCGAGCCGAAAGGGCACCAGATCGTGAGACGGCGAGATGACAGGG
ACACCACGCAGGGATCATCCCGACGGTCGCGATGGGCAGGCGGAATCGAA
CGACTGAACCCAACGACGAGGACGCTTTGTGTACAGCGGCCGTGAGAGCG
GTGT
UFO08775.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:39:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7564-RD | 10443 | CG7564-RD | 171..1254 | 9..1079 | 4965 | 98 | Plus |
| CG7564-RB | 2639 | CG7564-RB | 171..1254 | 9..1079 | 4965 | 98 | Plus |
| CG7564-RC | 1672 | CG7564-RC | 171..1254 | 9..1079 | 4965 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:39:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17514468..17515467 | 9..1003 | 4755 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:39:15 has no hits.
UFO08775.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:14 Download gff for
UFO08775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7564-RA | 161..1264 | 1..1090 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:52:28 Download gff for
UFO08775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7564-RA | 162..1265 | 1..1090 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:45:01 Download gff for
UFO08775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7564-RC | 162..1265 | 1..1090 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:45:01 Download gff for
UFO08775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17514459..17515562 | 1..1090 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:52:28 Download gff for
UFO08775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17507559..17508662 | 1..1090 | 97 | | Plus |
