UFO08783.5prime Sequence
1132 bp (1035 high quality bases) assembled on 2011-08-05
> UFO08783.5prime
CAGTCGACATGAGTGGTTACCAATATCTGGACGTGAAGATAAAACTCCGT
GATCCAGACTCCGTGACTCTGACGCCCGTATTCTTCTGTGGCTGCATCCA
TAGCTCCTTGGCTAGTATTTTTGGCGAAATAGGTGGCCAGACCATACTGG
AAATTGTGAAATTTAGTTCCAGCCAAAAACGCTCCATTCTCCGGGTGCCC
GAGAACGTCCTGGATCGCGTTCGCGTAGCTATAGCCCTAATAGGATACTA
CCAGGAGGTGCCCTGCCATTTTCAGGTGCTCAGCACATCCCGAAAGCCCT
TGGATTTTGAGGAATCCCCCGAGGAGTTTGTAGCATTTAACGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAG
GAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACA
AACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTT
GCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATA
TTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGA
GACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTT
CACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAA
TCGTCGTGTATTCACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGGA
AAACGGTGTAACAAGGGTGAACCACTATCCCATATCACAGCTCACGTCTT
TCATTGCATACGAAATCGATGAGCATTCATCAGCGGCAAGAATTGTGAAT
AAAGGCGGATAAACTTGGCCTTATTTTTCTTAACGCTTTAAAACGCCGTA
ATTCAGCTGACGGTCTGTTAGTTACATTGAGC
UFO08783.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:39:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7950-RA | 1168 | CG7950-RA | 144..477 | 8..341 | 1670 | 100 | Plus |
| CG34317-RA | 1168 | CG34317-RA | 144..477 | 8..341 | 1670 | 100 | Plus |
| CG7950-RB | 1192 | CG7950-RB | 201..501 | 41..341 | 1505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:39:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30057140..30057440 | 41..341 | 1505 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:39:47 has no hits.
UFO08783.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:18 Download gff for
UFO08783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34317-RA | 145..490 | 1..350 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:55:53 Download gff for
UFO08783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34317-RA | 139..484 | 1..350 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:45:13 Download gff for
UFO08783.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34317-RA | 139..484 | 1..350 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:45:13 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 14:55:53 has no hits.
