UFO08784.5prime Sequence
1093 bp (963 high quality bases) assembled on 2011-08-05
> UFO08784.5prime
CAGTCGACATGCGACTGCCATATCGAAATAAGAAGGTCACCCTGTGGGTG
CTCTTCGGCATCATCGTCATCACCATGTTCCTATTCAAATTCACCGAACT
GCGGCCCACATGCCTCTTCAAGGTGGACGCCGCCAACGAGCTCTCCTCCC
AAATGGTTCGCGTTGAGAAATACCTCACAGATGACAATCAACGCGTTTAT
TCATACAACCGTGAGATGCCATTAATATTCATAGGCGGCGTGCCGAGATC
TGGGACGACTTTGATGCGCGCCATGCTGGATGCCCATCCCGATGTGCGCT
GCGGGCAGGAAACCCGTGTCATTCCGCGCATCCTGCAGCTGCGCTCGCAC
TGGCTGAAGTCCGAGAAGGAGTCGCTCCGCCTGCAGGAGGCCGGCATCAC
CAAAGAGGTCATGAACAGTGCCATCGCGCAGTTCTGTCTGGAAATCATCG
CCAAACACGGCGAGCCGGCGCCGCGCTTATGCAACAAGGATCCGCTGACG
CTGAAAATGGGCTCCTATGTCATCGAGCTATTTCCGAACGCTAAATTCCT
ATTCATGGTGCGCGACGGCCGGGCGACAGTTCATTCGATTATATCGCGCA
AGGTGACAATCACCGGCTTCGATTTGAGCAGCTACCGGCAGTGCATGCAG
AAGTGGAACCACGCCATCGAGGTGATGCACGAGCAGTGCCGGGACATCGG
CAAGGACCGCTGCATGATGGTTTACTATGAGCAGCTGGTACTGCATCCCG
AGGAGTGGATGCGAAAGATACTGAAATTCCTGGACGTGCCATGGAACGAT
GCGGTGCTGCACCACGAGGAGTTTCATAAATAAACCGAACGGTGTGCCTC
TGTCCAAGGTGAACGTTTCGTCGGACCAGGTTATCAAGCCGGGTTATCTG
GAAGGCGATTGTCAAATGGGTTGGCCAATTACCCGGCGACGTGGTGCGCG
ACATGGCCCAACATAGCGCCCATGCTGTCCGTGCTCGGCTACAATCCGTA
CGCGAATCCGCGGGACTATGTTAAGTCAATTCGAATGCTGTTGGGAGAAG
GCTAAGCTTTTTCTTAGACCATATCCGTTTGCGCCGCCGGGAC
UFO08784.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:39:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tango13-RG | 4728 | CG32632-RG | 1881..2917 | 9..1048 | 4855 | 98.3 | Plus |
| Tango13-RD | 4534 | CG32632-RD | 1687..2723 | 9..1048 | 4855 | 98.3 | Plus |
| Tango13-RC | 3344 | CG32632-RC | 1687..2723 | 9..1048 | 4855 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:39:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13584156..13584398 | 298..540 | 1215 | 100 | Plus |
| X | 23542271 | X | 13584861..13585042 | 540..721 | 910 | 100 | Plus |
| X | 23542271 | X | 13577506..13577664 | 9..167 | 795 | 100 | Plus |
| X | 23542271 | X | 13580048..13580185 | 161..298 | 675 | 99.3 | Plus |
| X | 23542271 | X | 13585690..13585828 | 719..858 | 650 | 99.3 | Plus |
| X | 23542271 | X | 13585903..13586059 | 867..1025 | 545 | 92.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:39:51 has no hits.
UFO08784.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:19 Download gff for
UFO08784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango13-RC | 1679..2716 | 1..1041 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:56:22 Download gff for
UFO08784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango13-RC | 1680..2717 | 1..1041 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:45:15 Download gff for
UFO08784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango13-RC | 1680..2717 | 1..1041 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:45:15 Download gff for
UFO08784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13577499..13577664 | 1..167 | 97 | -> | Plus |
| X | 13580055..13580185 | 168..298 | 100 | -> | Plus |
| X | 13584157..13584397 | 299..539 | 100 | -> | Plus |
| X | 13584861..13585040 | 540..719 | 100 | -> | Plus |
| X | 13585691..13585827 | 720..857 | 99 | -> | Plus |
| X | 13585894..13586054 | 858..1020 | 92 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:56:22 Download gff for
UFO08784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13471532..13471697 | 1..167 | 97 | -> | Plus |
| arm_X | 13474088..13474218 | 168..298 | 100 | -> | Plus |
| arm_X | 13478190..13478430 | 299..539 | 100 | -> | Plus |
| arm_X | 13478894..13479073 | 540..719 | 100 | -> | Plus |
| arm_X | 13479724..13479860 | 720..857 | 99 | -> | Plus |
| arm_X | 13479927..13480087 | 858..1020 | 92 | -> | Plus |
