UFO08789.5prime Sequence
1102 bp (995 high quality bases) assembled on 2011-08-05
> UFO08789.5prime
CAGTCGACATGCAGCAGAAAGTCGAAGAGAAAATCGATCCCCTGACACGC
ATTCAGGAGGAGATCAAGGAGGTAGTGCGGCGCGAGGAGGAGTACCGCCA
GCTGGCCACACTGTCGTCCAGCGCCTCGATCACTTCCGCTTCGCCGGATT
TCGAGACATACACGGTTAATAGTAACTTTGAGCCGAAACTGCAGCAGGAT
GATGAGCACGATCTGGTCGAAAGTCCAGATCAGGACCAGGGCATGCTCGT
TACCGCCCAGCCGGCGGCCGTGCAGACCACCTCGCTCCTGCTGCCCATCG
ACGAGCTGTCCAACACACCATCGCTGGCCTCCAGTGTGAATAGCGCCAAG
GAGGAGAGCCTCGATGGCCAGCACTCGGATGATTCGGGCATTTCGGCCTC
CTCGCAGAGCAACATCCTCATCACTGGGATCACCACGAATGTGGCCAAGC
AGCAGCCACTCAAACTGACCGTGGTGACGCGTCAGGAGCAGCGTTACATT
GGGCCCAACTGCTATAATCTGACACCTGAACCGCCACAGCAGAAGCTGAT
CACCCGCACCATATCCACGCCCCAGCTGAGTGGTCTGCCCCAGAAGCGGC
AGTTTGCCTTCGGTGGCGCCACCAAGGGTGTGATGCAGCGCTTCATTGCC
TCGCATGGCAAGTTGGGCAACACTAGCCCGCTGCCGGCTGCATCTCCAAT
GACGTTGTCCCTGGGCGCCGCCAATGGTAATGGCGGCCTAAATGTCAATG
GCCAGATCAACAATATCAGCAGCAGCAACAATAACAACAACAACAACAAC
AACACCCTCAAGCTGAACACTCGCACAGCCATGGCTTTCCTGGAGTCTGG
AGGTTCCACGGGCGGCATCAACTCGTCATCGGCGGCCCTATCGTCGGCGG
CTATCGAACGCGACTCGGAGCAGCCCTGCGACGAGGATATGTCCCCGTGA
GCAGAGATCAGCGTGAGCTGCAGGATCTGGAGTCACGCGATCGGATGAGC
GTCTGCGCCAAGATCACAGCCAGAACCACTGAAGCCTCCCTGGACAGCTG
CAACTCAGCACAATGAATGAGGCCGATGCATGATGATGATGAGACTCAAG
TT
UFO08789.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:40:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2556-RA | 2304 | CG2556-RA | 386..1482 | 9..1092 | 5025 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:40:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12514482..12515451 | 28..990 | 4560 | 99 | Plus |
Blast to na_te.dros performed 2014-11-26 23:40:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2433..2497 | 747..810 | 187 | 78.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2483..2535 | 751..803 | 157 | 77.4 | Plus |
UFO08789.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:21 Download gff for
UFO08789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2556-RA | 406..1524 | 1..1102 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:57:50 Download gff for
UFO08789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2556-RA | 379..1497 | 1..1102 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:45:21 Download gff for
UFO08789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2556-RA | 379..1497 | 1..1102 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:45:21 Download gff for
UFO08789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12514484..12515517 | 30..1049 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:57:50 Download gff for
UFO08789.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12408517..12409550 | 30..1049 | 98 | -> | Plus |
