UFO08791.5prime Sequence
1104 bp (982 high quality bases) assembled on 2011-08-05
> UFO08791.5prime
CAGTCGACATGCCAGGATTGTGCATTGGAATCCTTCTGCTCATTGGTTTT
GGATGCACCACTGCCTACAAGATCCCCACACCGACTGTGGAGCTCCTTGA
GACTGGATTTAGCGTTTCCATACCGGATGAAGAGGGCGTAAAAGTGGTGG
CCTTTAATGTAAATCGCAATCGGAATTTCACATCCTTCATAAACGAGGGA
CAGTACAATGTGAGATTGACTGAACCCCAGAACGGCAGGTGGACGACCAA
CTTCAGTTCGGTTCCCTTGAGATCCCAAGATGTTCTATACCTTTGGACAA
GTGTGCAGCACCAAAAGGCTGTGTATCAAGATCTGGCGCAGCCCCTGCCA
GTCTGCAATCTCGGCGGAGAGTATCGGCCCAGGGGATGTTCGCCCGGTGA
TGATGACTTTACGGATGACAACCAGCTAAGTACTGAGGACAGTGCTTTGG
AACCCACCGCTCCCTCCGTCTGTGAACCTTCTGAAAGCCAGGTTTCGCCG
CAAATCGGTGTTTCCATATGTAAGGGACAACTTTTGTTTGAGGAGACTTT
TGATCAGCTGAATGAATCTCTGTGGATACATGATGTTCGCCTGCCCCTCG
ACTCCAAGGATGCAGAGTTCGTCTTGTACGACGGGAAGGCCAAAGTTCAC
GATGGCAACCTGGTGATTGAGCCGCTTCTTTGGTCCAGCTATCGCCCGGA
TCTCTCCATAGCCAACTCCAGGCTCGATCTATCGGAGCGTTGTACTGGAA
CCCATAACAGAATTAAGGAATGCATCCTGCATTCCACGGGCAGTGGACCC
AGTGGGATAATGCCCCCAATTGTAACACCTCGAATCAGCACCAAGGAAAC
CTTTGCCTTTCAATACGGACGCATTGAGATCCGTGCCAAGCTACCAAAGG
AGATTGGATAGTACCACTCCTACTACTCGAACCCTCACGAATGGTACGGG
CAATCGGGCTACGAATCCGGCCAGCTGCGAGTGGCTTGACAGGGGTAACT
CCGGTGCTGAGATGCGCGCGGAAGCTTGTAATGGTAAATCCTATACGGAG
GAACCGTACTCTCCACGAATGCCCAACGAAGGAGACTTATGGCGTGAAAC
AAGG
UFO08791.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:40:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GNBP1-RA | 1785 | CG6895-RA | 207..1302 | 9..1093 | 5070 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:40:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18676295..18677083 | 126..913 | 3895 | 99.9 | Plus |
3L | 28110227 | 3L | 18676006..18676123 | 9..126 | 590 | 100 | Plus |
3L | 28110227 | 3L | 18677145..18677324 | 911..1082 | 335 | 90.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:40:14 has no hits.
UFO08791.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:15:23 Download gff for
UFO08791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GNBP1-RA | 186..1292 | 1..1097 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:58:47 Download gff for
UFO08791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GNBP1-RA | 199..1305 | 1..1097 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:45:26 Download gff for
UFO08791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GNBP1-RA | 199..1305 | 1..1097 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:45:26 Download gff for
UFO08791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18675998..18676123 | 1..126 | 96 | -> | Plus |
3L | 18676296..18677080 | 127..910 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:58:47 Download gff for
UFO08791.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18669098..18669223 | 1..126 | 96 | -> | Plus |
arm_3L | 18669396..18670180 | 127..910 | 99 | -> | Plus |