UFO08804.5prime Sequence
1118 bp (1002 high quality bases) assembled on 2011-08-10
> UFO08804.5prime
CAGTCGACATGAAGTCTGTTGTTGCCCTGTTTGCCACCGTTTTGGCCATT
ATTTTGGTGGCTGGAGTGAGTGCGGATGCGGGTCGCTCCGCCTGCAAGGA
TGAGTCCGAGATTGGACAGACCTATACGCATCACTTCGATGCCGCTAAGT
ACTGGCTGTGCGAGACCCTTGGCGTTCCGGCCACCGAGGTGGACTGCCCC
GCGGGACTGGCCTACATGCATCTGCTCAAGGAGTGCATCCCATGGGCCAG
TTACATCTGGAAGAAGCCCGAGATGCCACCAACTGTGGCCGCAAGCTTTC
TAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAAT
CATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACT
AGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTC
TGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGG
AGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGC
AGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAA
ACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTG
CGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATAT
TGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAG
ACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTC
ACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAAT
CGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGG
AAAACGGTGTAACAAGGTGAACACTATCCCATATCACAGCTCACCGTCTT
TCATTGCCATACGAAATTCCGGATGGGCATTCATCAGCGGGCCAGAATGG
TGAATTACGCGAATAAACTGGTGCCTTATTTTTCTTTACGTCTTTAAAAG
CCCGTAATATCCAGCTGACGTTGTTATAGTACATGGACCACTGACTGAAT
GCTCAAGTCTTTACAGCA
UFO08804.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:44:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14300-RA | 357 | CG14300-RA | 46..327 | 9..290 | 1410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:44:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18693323..18693595 | 290..18 | 1365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:44:55 has no hits.
UFO08804.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:03 Download gff for
UFO08804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14300-RA | 21..315 | 1..294 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:28:53 Download gff for
UFO08804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14300-RA | 32..326 | 1..294 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:18 Download gff for
UFO08804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14300-RA | 37..331 | 1..294 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:18 Download gff for
UFO08804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18693323..18693597 | 12..290 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:28:53 Download gff for
UFO08804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14519045..14519319 | 12..290 | 98 | | Minus |
