UFO08810.5prime Sequence
1026 bp (1010 high quality bases) assembled on 2011-08-10
> UFO08810.5prime
CAGTCGACATGGCGAACACCCTGAGAACTCTCGACCCAAAGTTGGCGGCT
CTGGCCAAAAGTGAGTGCAACGAGGAGCAGGCGCAGCGAGCGGAGATTAT
TGCCACCATTAAGACATGGATCACCAAGTCGCCGCACCTTAAGGCGCCCA
CGGATGAGCAGCTTATCCTGGCCTTTCTGCGGCGTTGCCGTTTCAGCCAG
GAGGAGACCAAACGGCGATTCGACAACTACTACTCCCTGCGCAGCGTGTT
CCCGGAGGTTCTGGGATCCCGACAGGTGGACGAGGCCCTGCTCACCCAGT
TGCAACGCGGAATCCATGTGATACCCATGCGACCTGTGAGTCCCGAGGGG
CCAAGGGTTATCATCTCGCAGTTCCGAAACATCGATCCCAAGAAATCGAA
TCCCCGCGAAGCCTTCAAACTGATCTTCATAATGTTGGAACTATTGGCTT
TGGAGTGCGATAATGCCGCGATTTCCGGCTTGATCTGGGTTGTGGATGCC
AGAGATGTTACCATGGAGCAGATGATGCAGTACGATCCCTTCCTGCTGAA
GAAGGCATTTGCTCTGGTGGACCAATGCATACCACTGCGATTTGTTGAGA
TTCATATGATCAATATGCGCAAGGAGGGACAAACCATATTCAATTTTGTA
ACGAAGTTTTTGCCCTCCAAACTGCCTTTCAAGTTCGTGGTCCACAAAAA
GTCGGAGGATCTGTACCAGCACCTGCCCAGAGATGTGATGACCATCGAGT
ATGGTGGCACCAATGGCTATCAGGCAGAGGCAGTGGATCATTGGCGCCAG
AAAGCTGCTGGACAGCAAGGATTATCTGGGCAAGGATGCCCAGTATGGTA
CTAATGAGAAACTGCGCGTCGGATTGGCCAGTGCCTGGGCCAATGGAGAC
TGGACGGGATGAGCGGTTCCTTCCGCAATTGGAGCTAGATGCAAGCTTCT
AGACCATTCCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATTAT
CATATCAATAACCATTAATCACCAAC
UFO08810.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:45:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10300-RA | 1484 | CG10300-RA | 32..964 | 9..940 | 4580 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:45:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23712093..23712466 | 310..683 | 1870 | 100 | Plus |
| 3R | 32079331 | 3R | 23711558..23711859 | 9..310 | 1510 | 100 | Plus |
| 3R | 32079331 | 3R | 23712534..23712793 | 682..940 | 1140 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:45:17 has no hits.
UFO08810.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:06 Download gff for
UFO08810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10300-RA | 23..966 | 1..945 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:31:22 Download gff for
UFO08810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10300-RA | 25..968 | 1..945 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:26 Download gff for
UFO08810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10300-RA | 25..968 | 1..945 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:26 Download gff for
UFO08810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23711551..23711859 | 1..310 | 98 | -> | Plus |
| 3R | 23712094..23712466 | 311..683 | 100 | -> | Plus |
| 3R | 23712536..23712797 | 684..945 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:31:22 Download gff for
UFO08810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19537273..19537581 | 1..310 | 98 | -> | Plus |
| arm_3R | 19537816..19538188 | 311..683 | 100 | -> | Plus |
| arm_3R | 19538258..19538519 | 684..945 | 97 | | Plus |
