UFO08812.5prime Sequence
1073 bp (988 high quality bases) assembled on 2011-08-10
> UFO08812.5prime
CAGTCGACATGTCCGTGCGCCACGACTGGTACCAGTCGGAGACCAAGGTG
GTCATCACCGTGCTCCTGAAGAACGCCGTCGATAAGAACTATGCTGTGGA
GATTACCCAGAAGCGAGTCCACATGACGGCGGATGGCTACGAGTTGGACC
TGAAGCTGCTTCATCCCATTGTTGTGGAGCGTTCCTCCTACAAGGCCTTT
TCGACCAAAGTGGAAATCACACTGGCTAAGGAGACGGGAATTCGGTGGGA
GAATCTGGAGGAGGCCATCGTGGCTGCACCGGTGAAACCCAAGGCCAAGA
ACTGGGACCAGCTGGTCAGCGAGGAGGAAAAGATCGACGAGAAGGAGGCC
AAGGGCGAGGCGGCCCTCACCAACCTGTTCAAGAAAATCTACAGCTCATC
CTCGCCCGAGGTCCAAAAGGCCATGAACAAGTCCTTCTCGGAGTCCGGAG
GCACCGTGCTCAGCACCAACTGGAATGAGGTGGGCAAAGAAAGAGTCACC
GTGAAGCCTCCAAATGGAACCGAGTTCCGCGAGTGGGAGAAGGCAAGCTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGA
CTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACA
GGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATC
GCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCAC
AAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCT
TGCGTATATATTTGCCCATGGTGAAACGGGGCGAAGAGTGTCATATGCCA
CGTTTAATCAAACTGTGAACTCACCAGATGCTGAACGAAAAAATATTCTC
AATAACGTTAGGAATAGCAGCTTCACGGTAACCGCCAATCTGCAATATTG
TGTAGAACTGCGGAATTCCGTCT
UFO08812.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:45:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sgt1-RA | 1085 | CG9617-RA | 153..686 | 9..542 | 2670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:45:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8304589..8305122 | 542..9 | 2670 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:45:20 has no hits.
UFO08812.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:07 Download gff for
UFO08812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sgt1-RA | 151..696 | 1..548 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:31:50 Download gff for
UFO08812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sgt1-RA | 146..691 | 1..548 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:27 Download gff for
UFO08812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sgt1-RA | 146..691 | 1..548 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:27 Download gff for
UFO08812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8304584..8305129 | 1..548 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:31:50 Download gff for
UFO08812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4130306..4130851 | 1..548 | 98 | | Minus |
