UFO08821.5prime Sequence
1115 bp (989 high quality bases) assembled on 2011-08-10
> UFO08821.5prime
CAGTCGCATGATGAAGTTCAGTTGTGTCCGCGTGGCGATGAGATGCAGTG
GAGCCCACTCCATCCTCGAGAGAAATATGCTCTGCAGGATAATAGGGCGC
CACAAATGTAGCTGTTTGACCCTGGAGAACACGTTCAAGTGCTACGACCT
GGAGAATGGACCCACAATGGACGTGGAGCTGTCCAGGGAGGACGCCCTGA
CGATGTACACGCAGATGCTGGAACTGCGCCGGTTCGAGACGGTGGCGGGC
AACTACTATAAGGAGCGAAAAATCCGCGGCTTCTGCCATTTATATAACGG
ACAGGAGGCCGTCGCTGTTGGCATGAAGCAGCGTTTGAGGTCCTGCGACT
CGGTCATAACGGCATACCGTTGTCATGCCTGGACCTATTTAATGGGTGTT
TCCCTTTACGAAATAATGGCGGAATTGTTCGGAGTTCGAACTGGATGCAG
CCGGGGCAAAGGTGGCTCTATGCACATGTACAGCGATAAGTTTTATGGCG
GCAATGGTATCGTTGGTGCCCAAGTTCCGCTCGGCGCGGGAATTGGCCTC
GCGCACAGTTATCGCAAGGACAACGGCGTGTCGGTGGTCCTTTATGGTGA
TGGTGCCGCCAATCAGGGCCAGATCTTTGAGTCCTTCAACATGGCCAAGC
TGTGGTGCTTGCCCTGCATATTCGTTTGCGAGAACAATCACTACGGCATG
GGCACCCACGTTAAGCGGGCCTCTGCCATGACGGAGTTCTACATGCGTGG
CCAATATATCCCTGGTCTTTGGGTCGATGGCAATCAGTGCTGGCCGTGCG
TAGCGCCACCCAATTCGCCGTGGACCATGCCCTCAAGCACGGACCCATTG
TGCTCGAGATGAGCACCTATCGCTATGTGGGTCCCCTCCATGTCCGATCC
GGGTACATCGTATCGCTCGAGAGAAGAAGTCCAATCGACGGAGGGAGAAA
CGCGATTCCGATTACAGTTTCCGCAATCCGATCATCGCCTGTGTTCTTCG
CGACAAGGAGGACTTGAAGCCTGGATGATAAGAACTAGGACCAGTGATAG
CATTTGCAAGAATGCCTCACCGCACGGGAGTAGACTGGATGAGCTGCACC
CGTATCTATGCCTAG
UFO08821.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:45:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7024-RA | 1878 | CG7024-RA | 256..1368 | 8..1112 | 4895 | 97.1 | Plus |
| l(1)G0334-RB | 1992 | CG7010-RB | 889..1354 | 451..916 | 285 | 72.5 | Plus |
| l(1)G0334-RD | 1667 | CG7010-RD | 564..1029 | 451..916 | 285 | 72.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:45:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4706005..4706908 | 131..1033 | 4010 | 97.7 | Plus |
| X | 23542271 | X | 4705564..4705686 | 8..130 | 615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:45:51 has no hits.
UFO08821.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:11 Download gff for
UFO08821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7024-RA | 256..1371 | 8..1115 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:35:24 Download gff for
UFO08821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7024-RA | 256..1371 | 8..1115 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:41 Download gff for
UFO08821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7024-RA | 256..1371 | 8..1115 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:41 Download gff for
UFO08821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4705564..4705686 | 8..130 | 100 | -> | Plus |
| X | 4706005..4706997 | 131..1115 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:35:24 Download gff for
UFO08821.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4600038..4601030 | 131..1115 | 96 | | Plus |
| arm_X | 4599597..4599719 | 8..130 | 100 | -> | Plus |
