UFO08823.5prime Sequence
1089 bp (974 high quality bases) assembled on 2011-08-10
> UFO08823.5prime
CAGTCGACATGGCTCTACGAGTGCTATGGAGGCGAATGACGAATGCCATG
GACCGGTTTCATCAGATAGCCTTCAGCCCAAAGTATCTCCTATTTACGAA
CATCGGGATCTCTGTGGGCCTGAGCATGGTGGGCGATACCATGGAGCAGT
CCTATGAGCGCCTCATAGGGGAGCTTCCGGATTGGAACCGAACGCGTACC
ATTAGGATGGGCATATCCGGGTTGACGGTGGGCCTGGTGTGCCACTATTG
GTACCAACATCTGGACTACTTGTTTCCGAAGCGCACCTATAAGGTGGTTG
TAGTCAAGATTTTGCTGGACCAGTTCATCTGCTCACCCTTTTACATCGCC
GTATTCTTTCTCACAATGGCCATTCTGGAGGACAATACGTGGGAGGAGCT
GGAGCAGGAGATTAGGGAGAAGGCCTTAGTACTGTACGCTGCTGAGTGGA
CCGTGTGGCCATTGGCACAGTTCATCAACTTTCTGCTGATCAAGCCGCAG
TACAGGGTATTCTATGACAACACCATCAGTTTGGGCTACGATATCTATAC
GTCTCAAGTTAAGTATCGTAAGAAGCCGGAGCCAAAAGATAATTCGGCAA
GCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTC
ATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGA
GCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATC
AACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACT
CATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAGGGAAGCCA
TCACAAACGGCATGATGAAACTTGAATCGCCAGCGGCATCAGCACTGTCG
CCTTGCGGAATAATATTTGCCCATGTGAACGGGGGCGAAAAGTTGTCCAT
ATTGTCCCGTTATCAAACTGGTGAACTCACCAGGATGGCTGGAACGAAAC
AATCTCCATACCCTTTAGGAATAGCAGCTTCCGTAACGG
UFO08823.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:46:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5906-RA | 849 | CG5906-RA | 69..656 | 9..596 | 2895 | 99.5 | Plus |
CG1662-RB | 1603 | CG1662-RB | 824..960 | 406..542 | 205 | 78.4 | Plus |
CG1662-RA | 1282 | CG1662-RA | 991..1127 | 406..542 | 205 | 78.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:45:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11870650..11871237 | 596..9 | 2895 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:45:59 has no hits.
UFO08823.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:12 Download gff for
UFO08823.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5906-RA | 69..659 | 9..600 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:36:23 Download gff for
UFO08823.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5906-RA | 69..659 | 9..600 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:45 Download gff for
UFO08823.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5906-RA | 69..659 | 9..600 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:45 Download gff for
UFO08823.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11870646..11871237 | 9..600 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:36:23 Download gff for
UFO08823.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11863746..11864337 | 9..600 | 99 | | Minus |