UFO08825.5prime Sequence
1109 bp (1003 high quality bases) assembled on 2011-08-10
> UFO08825.5prime
CAGTCGACATGACCATCACCAACTGGTTTAATTGGTCCGTAAAGGATTTA
AGCAATGAGTCCCATGCGAGACCCAAGTTGATTCCGGGATTCGACCAGTT
GGATAAGAGGCTGCAGGCGGCGCTTCAGGAGCGGGACGTGCAAAAGCATC
AGCGCAAGCGTACACAGGCGGGTGGTGGCCAAAGCCAGGCAAAGCCCAAA
AAGCTCAAGACGACCAGAAAACAGACACCAAGGGTATGCAAATTCCAGAA
GGTTTACACTGAGAAACGCAAGAAGCTAAAACGAGAGGCCAACATGCAAA
GTAATGCGTTTCAGTTCCGGAGCAGACCTGTGCCCGATTTCGAGCGATCT
CATCGTCGTTTGGAAAGGCGCAAGCTGTACCTGAACTCTCTGCAAACGGT
GACGAAGCCCCGATGCCCTGCCACGCTGGCCACGTCAATGGTCGCTTTAA
ACAAGCGCCTAAAGAAGCAAAGGCAGAGCCGAAAGACATCCGACTTTGTG
CCCCGAATCAATCCAGGCTCTTCTATGGACTACCTCAACCGGCAGCCCTT
TACGCCGCTTGTCAAGTCCTCCTTTACCCATCCAAAACCTTTTCATCTCC
ATACGTCGGAGCGTGCTCTGCGCCGCCAAGTGTATGACGAGAGGAAAAGG
ATACGGATGGATCGGCGTTTGGAGCAGCAGACCATCGATTGGTTTGCACG
GGAAAGAAGCGAGTACTTTAAGCTACGCAAAATGACAAATTTCAAGGCTA
CGCCGAATCCCTGGAAGCAAACAAGGGTCACCGCTAGAAAAGATTCTCAG
GCAGCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTTGAGGTCATTA
CTGGATTTTTTCAACAGAGTTCAGCGAGCCTCGATATTCAAATTTACGCC
CCCGCCTGCACTCTATCGCAGTACTGTGTAATCCATAGCATTCTGCCGAC
TTGGGAAGC
UFO08825.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:46:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5781-RA | 898 | CG5781-RA | 53..850 | 9..806 | 3990 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:46:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12696474..12697271 | 806..9 | 3990 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:46:13 has no hits.
UFO08825.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:14 Download gff for
UFO08825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5781-RA | 504..1301 | 9..806 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:37:55 Download gff for
UFO08825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5781-RA | 53..850 | 9..806 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:50 Download gff for
UFO08825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5781-RA | 53..850 | 9..806 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:50 Download gff for
UFO08825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12696474..12697271 | 9..806 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:37:55 Download gff for
UFO08825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12696474..12697271 | 9..806 | 100 | | Minus |
