UFO08827.5prime Sequence
1038 bp (1038 high quality bases) assembled on 2011-08-10
> UFO08827.5prime
CAGTCGACATGGCCACCGCCGCAGCTGTAGCAAAAGTCGGAAAATCAGTG
CACCGCATTTTCGTGGGCAATCTACCGTGGACAGTGGGCCACCAGGAGTT
GCGTGGCTACTTCCGCGAGTTCGGACGCGTGGTGTCCGCCAACGTGATCT
TCGACAAGCGAACGGGGTGCTCGAAGGGCTACGGTTTCGTTAGCTTCAAC
AGTTTGACCGCGCTGGAGAAGATCGAGAACGAGCAGAAGCACATACTGGA
GGGCAACTACCTAAACATACAGAAATCTGCAAGCTTTCTAGACCATTCGT
TTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAAT
CATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATT
CTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAG
CTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGA
ACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTT
GCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTA
AATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATA
TTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGC
ACATCTTGCGAATATATGTGTAGAAACTGCGGGAAATCGTCGTGGTATTC
ACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTACC
AAGGGTGAACACTATCCAATATCACCAGCTCACCGTCTTTCATTGCATAC
GAAATTCCGGATGACATTCATCAGGCGGGCAGAATGTGAATAAAGGCCGG
AAAAAACTGGGCTTTATTTTCTTTACGGGCCTTAAAAG
UFO08827.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:46:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33714-RB | 1279 | CG33714-RB | 87..357 | 8..278 | 1355 | 100 | Plus |
| CG33714-RA | 1278 | CG33714-RA | 86..356 | 8..278 | 1355 | 100 | Plus |
| CG33713-RB | 1278 | CG33713-RB | 86..356 | 8..278 | 1355 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:46:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21318858..21319128 | 278..8 | 1355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:46:22 has no hits.
UFO08827.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:16 Download gff for
UFO08827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33713-RB | 80..362 | 1..286 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:38:54 Download gff for
UFO08827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33713-RB | 80..362 | 1..286 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:52 Download gff for
UFO08827.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33713-RB | 80..362 | 1..286 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:47:52 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 15:38:54 has no hits.
