UFO08832.5prime Sequence
1087 bp (992 high quality bases) assembled on 2011-08-10
> UFO08832.5prime
CAGTCGACATGAAACTACCGTTAGCTTGCGCTGTGCTAAGCTGCTGCTTC
TTTTTGTTGGCAGCCGCCTCATCTTCTCCAGCTGCCGATGCTTCTTCTTC
AAAGCCCGCTTCATCTTCGGCTGAGACCTCATCCTCCGCTAAGCCAAAAA
GAGATGCTGGCCTAAGTTTCGGAGGAATATCCAGCTATCACGGCCCTTCT
CACAAATATCTGCCGCCCGCCTATGAGAGTCACCTTAACCTCGGCAGTTT
CCATGGAAGCTCGGCTGGTTATTCCGATTACCCCAGTCACTTCAAGGGCG
AGAGCAGTTACGGACACCACTTCGCACACGGACACTCCGGAAGCCACGGC
TACGCCAGTTCCAGTGGCCATGGAAGGCCCCATCATTACAGCGGTAGTGG
AGTTCCTAAAATCGAAACCTACATCGTTCAAACAAGTGGCGGCTCGAGTT
CCGGTCACAACTACCATGGTCAGGGACATGGACATGGAATCGGTCACGGG
ATCAGTCATGGAATCAGTCACGGCCTGAGTCACGGGCATGGATCTGGATT
GGCCTTTAAGTACGCACCATCTACCAGTGGAGCCTATCTGAATCTCGTTG
GGAATGAACACAAGACCAGCACATATGTGGTGGCCACTCCCGAGTACTCC
GGACACAGCCACGGAGCGAGGGGCAGCACCCACGGAATTGGCTACGGATC
GGCACCAGCCCACAGACCCAGCTACGGTGGCCACCTGCAAAGTCACGGCT
ATGGCAACAACTTTGGCCATGGCCCCAGCCATCACATCGCCCATGAACCA
GTCAGTCACGGACCTATCCCAAAGTTTGGATCACGGTCTGGAGCATGCCT
TGAGCACGGTCTGAGCCACGCCCTGAGATTGGGTCACTCTTCGGGAGGAC
AGTTCCACAGCACGCGCTGCCCCAGCCGGCGAGGAGCATTCTGGGTCTCT
TACGATGCTCCCGCCACGCCTTTTGAAAGGGATGCCGTTGAGCAGTTACG
CGTACCACTCATACCCGGCTACGATCACAAGAAGTCACTTGCCGGAATCA
TTGTCATGTGCAGTTGCTGAACTGGAACCTATGCGAT
UFO08832.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:46:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11382-RC | 1744 | CG11382-RC | 127..1192 | 8..1069 | 4960 | 98.2 | Plus |
| CG11382-RB | 1884 | CG11382-RB | 127..1192 | 8..1069 | 4960 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:46:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1210096..1211133 | 8..1039 | 4735 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:46:36 has no hits.
UFO08832.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:18 Download gff for
UFO08832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11382-RB | 1..1047 | 9..1050 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:40:23 Download gff for
UFO08832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11382-RB | 119..1174 | 1..1050 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:47:57 Download gff for
UFO08832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11382-RB | 119..1174 | 1..1050 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:47:57 Download gff for
UFO08832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1210088..1211133 | 1..1039 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:40:23 Download gff for
UFO08832.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1104121..1105166 | 1..1039 | 98 | -> | Plus |
