UFO08904.5prime Sequence
1158 bp (1016 high quality bases) assembled on 2011-08-10
> UFO08904.5prime
CAGTCGACATGAGAAGATCGAAAATTGCCCGCTTTCACACAATGGCCGCG
TTGGGCCTACTGCTGCTGGTGGGCGTGCATGGAGCCACGATAATCAGCAT
CAAGTACCCGGATAAGCCCGCCGTGGAGCCGCAGCCGGCCAAGAGGGATC
TCAGCCTGAGCTACGCAGCCACCAACATCGACTCCAAGGAGGGTACCCGC
GTGAAGACCATCACGGTGATCAAGAATGTGGGAGGCATTTCGGCGCCCGA
AGAAGCTGCGGCCTTGGGATCCTCCATCGCCAGCAGCCACAACCACAAGC
AGCAGCCGAAACTGATCATTGATCCCAGTCTGCACAAGAGCGAGGAGTGG
GCAAGTGCTTTCCGAGACAACTTTGACTCCTACGGAGCACTGCCCGATGT
GCCCGACATAGATGACCTATTCGAGTTTGTCAATCGCAAGAAGCCCGAGG
GTGAAAAGAAACCGGAGGAGGTGCCCAGCCAGAAGGAGGAAAGGGTGCCG
AAGGAGTTGCAAAAGCCGGCGGAGGAGACCACCACCAAGAAAGCCGGAGC
CAGTGAGCAAAGCGAGGGCGGGATCGTACCCAGTGGCAACATCGATAGCG
ACGAGGCTGTGGTCGAGAAGATAAAGGGTGATGCCGAACTGTTGCCGCAC
ATTAAGCAGGCCAACATCCTGCGCCTCCAGGCGGCCCACGCCCAAGCCCG
CTCGGGAGTACGAACCAAGGAGTCGCTGATCGCCGTCAACTACTCCACGC
CCATGCATCAGTGAGCCAGTACTTCGACAACTATGTCCAAGCGGTGCCAA
ATGGCTACGACTACCCAAAGCCCTGTGGCATGCAGCCTGACAACAGTATC
CAAGTGACCACGCCTTCAGCCGCACCTACGACATTCCGCAGAGCAACAGC
AGTGGCACTGGTGGTGGCAACCACCCGTACTTGGCTCCAGCGCTCACAAA
GAAGACGCAGATTCCGCCGATCACGGTGCAGCCTCGGTGCAACAGCAGCA
GCCTCAGCCTCCCATTACTCCTCCGGGAACTCGATGTGCCGCCTATAGTG
CCACCGCAGCCTCAGGGCAATGCCAATCTTTCCCAGCAGCCGCAACAGCC
TTCGGTGTGTTAATCTCCTCAACCGGAAGGTATTCCTGGGCGCGCCCTCT
GGAACGGG
UFO08904.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:54:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12003-RA | 1807 | CG12003-RA | 162..1265 | 9..1107 | 5290 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:54:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1566172..1567260 | 24..1107 | 5090 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:54:25 has no hits.
UFO08904.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:25 Download gff for
UFO08904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 157..1276 | 1..1118 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:21 Download gff for
UFO08904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 157..1276 | 1..1118 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:03 Download gff for
UFO08904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12003-RA | 157..1276 | 1..1118 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:03 Download gff for
UFO08904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1566172..1567271 | 24..1118 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:21 Download gff for
UFO08904.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1566172..1567271 | 24..1118 | 98 | | Plus |
