UFO08908.5prime Sequence
1108 bp (1005 high quality bases) assembled on 2011-08-10
> UFO08908.5prime
CAGTCGACATGCAGCTGACATACTTTCTCTTCCAAGTGGCAGTCGCCCTA
CTGGCGATCGTGACCTATATACTCCATCGCAAACTAACGTATTTTAAGAG
GCGTGGCATTCCGTATGATAAACCCCATCCTCTCAGAGGAAATATGGAGG
GATATAAGAAAACGAGGACCGTTCACGAAATCCACCAGGAATACTACAAC
AAATATCGAAATAGCAAGGCTCCTTTTGTGGGATTCTATCTGTTTCAGAA
GCCCGCCGCATTTGTTATAGATCTGGAGCTGGCCAAGCAAATACTGATCA
AGAACTTTTCCAATTTCACCGACAAGGGAATATACTACAACGAGAAAGAT
GATCCCATGTCAGCGCATCTCTTTAATTTGGATGGACCCCAGTGGCGTTT
GCTTAGGAGCAAACTATCCTCGACATTCACGTCGGGCAAAATGAAGTTCA
TGTATCCGACGGTTGTGTCCGTGGCTGAGGAATTTATGGCTGTGATGCAC
GAGAAGGTATCGGAAAACTCCATATTGGACGTTCGGGATCTGGTGGCCAG
GTTCACAGTGGATGTCATCGGAACCTGTGCCTTTGGCATCAAATGTAATA
GTCTGCGAGATGAGAAGGCCGAGTTTTTGCACTTTGGCAGGCGGGCTTTG
CTGGATTCTCGTCATGGTAATCTAGTAAGTGGCCTCATGCGCAGCTATCC
CAATTTGGCCAGGCGACTGGGCCTTTGCCGAAACACGGCTCAAATTCAGG
AGTTCTATCAAAGAATAGTTAAAGAGACTGTCACTTTGCGAGAAAAGGAG
AATATAAAACGGAATGATTTCATGGATATGCTAATCGGCTTGAAAAACCA
GAAGATATGACTCTTGAAAATGCGAGGTTGTTAAGGGCCTAACCATGGAT
GAGATCGTGCCCAAGCTTTTGTGTCTTCATCGCTGGCTTTGATACCTCAT
CCTCACCATGGGATTTGCCCTCTACGAGCTGTCAGATCCGAGTATCAGGA
TAGGTGAGAGCTGGAGTTGGGCAGTCTGAGCCACACGATCAAAGGTTACT
ACGATGCATCAGACCAAGTTACCCTCGCACAGTTAATGAACTCGCCAATT
AAAACTGA
UFO08908.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:54:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a18-RB | 4171 | CG13977-RB | 33..1101 | 9..1061 | 4860 | 97.9 | Plus |
| Cyp6a18-RA | 1730 | CG13977-RA | 33..1101 | 9..1061 | 4860 | 97.9 | Plus |
| Cyp6a8-RA | 1781 | CG10248-RA | 38..1008 | 16..981 | 1430 | 77.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:54:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27478707..27479684 | 9..981 | 4625 | 99.4 | Plus |
| 2R | 25286936 | 2R | 14888003..14888973 | 981..16 | 1260 | 76.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:54:42 has no hits.
UFO08908.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:28 Download gff for
UFO08908.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a18-RA | 24..1066 | 1..1031 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:29 Download gff for
UFO08908.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a18-RA | 26..1068 | 1..1031 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:12 Download gff for
UFO08908.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a18-RA | 26..1068 | 1..1031 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:12 Download gff for
UFO08908.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27478700..27479742 | 1..1031 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:29 Download gff for
UFO08908.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23304422..23305464 | 1..1031 | 97 | | Plus |
