UFO08914.5prime Sequence
1132 bp (996 high quality bases) assembled on 2011-08-10
> UFO08914.5prime
CAGTCGACATGTCTTTAATAGCCATTGAAAGGGTGTTATGTGGCTGGCCC
AAGATTTGCCGCAAACTTATTGTAACGTCGCGGTCGCTGACCTCCGGCTT
GCGGCGGGCACTGGTCAAGCAGCCCCGTAAAGGCGGAGATGTTGGAAAAC
CCGGAATGGAGCTTGGGCGCTGTTCGTGCTTTGGACTCCGTGTGAACCTC
AGCAATGCATCCGTCGTATACGTTGGCCACCGACGCTACTCGACGTACGA
GAAGACGTCTACGCAAATTTTAACGAAGCTCTTTCCACAAACCTCTGAGG
AGTCCAACGACGAGGAAAGTCGTGAGCGGCGGAAACTTGAGGAGGAGGAG
GAGCAGAAGGAATTGGAGCGGGCATTTAGGCGGATGAAACTGGGCTTTGG
GCTTTTCGGCATAGGTAGCATGTTGTTCTCGTTTTGGGCTATATATTTCT
ATGGAAGGCCGTCCTTGGATGAGCACGGAAATGAAGTAATCGACGAATTT
AGTTGTCTGCCACAGATGCAGCAGCTTATGTGGCGGACATGGAAGTCGGT
GAACCGCTTTCAACGGTTTTTCAAAGAGCCGTCGAGAAAAAAGCTGCTTC
CTGATCCCCTTCAGCCCCCCTACGTGCAGCCGCCGTATACTTTGGTACTT
GAGATTAAGGATGTGCTGGTACATCCCGATTGGACCTACGAAACAGGATG
GCGCTTCAAGAAGCGCCCTGGCGTTGACGTGTTTTTGAAAGAATGTGCCA
AGTATTTTGAGATTGTTGTTTACACGGCGGAGCAAGGAGTTACTGTGTTC
CCGCTGGTCGACGCGCTTGATCCGAACGGCTGTATTATGTATCGCCTGCT
CGCGACTCTACGCACTTTGATGGAGGGCACCACGTGAAGAACCTTGACAC
CTCAACCGAGACCTAAAGCGAGTGTTGTCGTGACTGGGATAGAAATTCCA
CAAGTTTCACCCTTCGAATCATTCTCGATCCGCGGTGGTCTTGGAACGAA
CATGACACTACCTCTTGGACTCACGGTCGTTCCTATGTTCCTAGGAACGA
GTGGAATCGACGATGTCGGATGCTGCAATACTACAATCGTTATGAATCGT
TATCCAGTCGAACCGCGAAGCTGGTGACTATG
UFO08914.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:55:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ttm2-RA | 1513 | CG12313-RA | 184..1296 | 9..1105 | 4940 | 97.2 | Plus |
| ttm50-RB | 1868 | CG2713-RB | 785..1135 | 594..940 | 425 | 75.9 | Plus |
| ttm50-RA | 1728 | CG2713-RA | 785..1135 | 594..940 | 425 | 75.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:55:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 275338..276430 | 9..1088 | 4655 | 97 | Plus |
| X | 23542271 | X | 2730972..2731278 | 899..594 | 360 | 75.2 | Minus |
Blast to na_te.dros performed 2014-11-26 23:55:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 807..852 | 388..341 | 118 | 75 | Minus |
UFO08914.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:31 Download gff for
UFO08914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm2-RA | 175..1291 | 9..1108 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:42 Download gff for
UFO08914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm2-RA | 184..1300 | 9..1108 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:22 Download gff for
UFO08914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ttm2-RA | 184..1300 | 9..1108 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:22 Download gff for
UFO08914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 275338..276452 | 9..1106 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:42 Download gff for
UFO08914.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 275338..276452 | 9..1106 | 97 | -> | Plus |
