UFO08920.5prime Sequence
858 bp (761 high quality bases) assembled on 2011-08-10
> UFO08920.5prime
CAGTCGACATGGAAACTTGCGGCCTTATTTGTGTGAGCAGGGACTACGAG
AAGTTCCTGATGCGCTGCTCCTACTGTCCAACGGACGTGGAGGTGGCCCA
GTGGCAGGAGTTTGTGCTGCACATCCGCAACGTGCATAGCAAAGTAAGGA
GCATGGAAGACGACTTCGAGCCAGTGGGGGAAAATTCTACGGAGTCTGGG
CACGTAGATCCTCCAGAGGAGAAACCCCAAGCGGAAGAGTCGATATTCCA
GCAAGACGAATCGGCGGACGGAGCCTGTGTACAGCTGCATATTGACGCAG
TGCGTTCGTCGACAAACGAGACTGAGGAGTCGGACGTATCTTTGGTTACA
GATGAAGAAGAATCCGTCCAGGACGAGGATCCAAGTGAACCAGCTCTTGA
TGATGCCAATTTAAAAACCACACCCACATACAAGTTTCATCCATCCTTCT
TTCGCCGAGATCACCGAACCATAAAGTTCATAGAGATCTACAAGGAACAC
CCGTGCCTTTGGAATCCCGCTCACAGCGACTACGAGGAACCCAAGAAATG
CAAAGAAGCCCTGAAGCGTATGGCCATTGACTTGGAGGCAACTGTATCCG
TATTCCTGAACGAGATGGCCTTAAAGCTGGCCATCAAGAAAGTCCACATG
CAGTTCAACACCGTGCACAAGCGGGTGGTGTCTGGAAAACAGAAAACCTC
AATCGGTGGGCTTTCAGTATATACAAATTGTGTTGCTTTCTTGAACGATA
ACAACCGATGAAAAATGGGCTTCCAAATAACGAAAAATTAAGCTTTGATT
TCTCCCAGAAAAAAAGCTGACTACCTACCTGGAATGAGATGTACCAAACT
TTTCCGCA
UFO08920.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:55:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1602-RA | 1901 | CG1602-RA | 77..921 | 9..858 | 3810 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:55:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7518435..7518860 | 434..9 | 2130 | 100 | Minus |
| 2R | 25286936 | 2R | 7518061..7518380 | 755..433 | 1405 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:55:35 has no hits.
UFO08920.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:35 Download gff for
UFO08920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1602-RA | 62..905 | 9..857 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:56 Download gff for
UFO08920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1602-RA | 77..920 | 9..857 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:33 Download gff for
UFO08920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1602-RA | 77..920 | 9..857 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:33 Download gff for
UFO08920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7518025..7518378 | 435..792 | 96 | <- | Minus |
| 2R | 7518435..7518860 | 9..434 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:56 Download gff for
UFO08920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3405530..3405883 | 435..792 | 96 | <- | Minus |
| arm_2R | 3405940..3406365 | 9..434 | 100 | | Minus |
