UFO08922.5prime Sequence
1052 bp (674 high quality bases) assembled on 2011-08-10
> UFO08922.5prime
CAATCGACATGAACTCGCCGAGCGCCATTGCGGTGAAGGCCCAGATCCTG
GAGATGACGGGCGAGCACGTGGATCAGTTGCACGCGATGTGGTCGCAGTT
GTTCGAGGTCAAGACCTGCGGTGAGTTCCTCCTCCGGTTGAAGGACCATG
CGAACAGCTTCTTCACGGATTTGCTCAATGAGTCGCGCGAAAAGCAGCAG
GCGATCCTCAACGATATAGCCGCCTTGCGGGCAGAGGCCACCGACTTGAC
GCGCCTACTCCACGAGCCGCTGGACATTGGCGAGCGGCCGGAGTCCATGC
CGCTGGTCGTCTGGGAGCTGAAGCTGGACAAAAGCATCGAGCACTTACGC
GATCAGCTGGCCAGGCGGCGAGCGGAGATCTGTGAGCTTCTGCTGCAGCA
GGAGCAGCTGTGCGAGGAACTGGGAGAGCTGCCTCTGCCACTGTTGGCGG
ATCCACTGCCGCTGCCCGAGGAGATGGACGCCTTTCGGAATCGCCTGGGC
CGGCTACGCGATCAGCGAGTGCTGCGCCTCATAGAGATGGACCAGCTGCG
CCAGGCCATTAAGCACGACATGAAGCTGCTTGAGTGCCTGCCCCAGACGG
ACACCGAGGAGCGTCTGCTCAACCAGGTGGATCACTGCCTAACGCCGGAG
ACCTTCGAGCTCCTGCGCAACATGCAAAAGAACTTCGCCGACCAGGTGAA
GGAGCTGAGGGAGCGCATCGACGATATGCGCGAAAAGATCCATGTGCTGT
GGGACAGACTCCAGGAGACAGACGAGTATGCCATGCGTCGCGTGCGCGAG
GCTACGACCTACACTCAACGCCCCTACGATGTCCTGCGGGAGGAACTGCA
TCGCTGCCAGGCCCTGCGACGTCAGATCTGAAAACCTTCATCGAGCAGCC
TACGCATCGAGATCATGGAGATGTGGGATCTCACTCCTCATGAGCCACCA
GTAGCGCATGCGCTTCCTCGACTACTACCACCTACTGGGTACCACGAAGA
TCGGCTGAGCTCCGCCAACTTGGCCTGGACAACCCTCAAAACCTTCTTAC
AC
UFO08922.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:54:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| feo-RA | 2424 | CG11207-RA | 266..1301 | 9..1047 | 4655 | 97 | Plus |
| sofe-RB | 2414 | CG1655-RB | 180..1056 | 55..931 | 680 | 72.7 | Plus |
| sofe-RA | 2272 | CG1655-RA | 180..1056 | 55..931 | 680 | 72.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:54:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10853648..10854604 | 966..9 | 4465 | 98.4 | Minus |
| X | 23542271 | X | 10856358..10857234 | 931..55 | 600 | 71.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:54:51 has no hits.
UFO08922.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:29 Download gff for
UFO08922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| feo-RA | 268..1208 | 2..947 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:34 Download gff for
UFO08922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| feo-RA | 263..1203 | 2..947 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:15 Download gff for
UFO08922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| feo-RA | 263..1203 | 2..947 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:15 Download gff for
UFO08922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10853679..10854607 | 2..934 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:34 Download gff for
UFO08922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10747712..10748640 | 2..934 | 98 | | Minus |
