UFO08924.5prime Sequence
1102 bp (1018 high quality bases) assembled on 2011-08-10
> UFO08924.5prime
CAGTCGACATGGCTAACCGCGATGTATTCTCAAAGATCCTGCCAAATGTC
AAGTTGGGCACCCGCTACGACGAGGATGGGCGTGAAGTTCAGGTGGAGCG
TCGCGAGGACTCGGATGCCACGGCCAAGGAGCAGGACACCTTCGACATAC
TGGTGGCAGCCGGATATTATCGTGCCCGCATCAAGGGCTTATCCGCATTC
GATAAGGTTGTGGGCGGTATGACTTGGTGCATCGAATGCTGCGACTACGA
TGTGGACGTGGACCTTCTGTTCCATGAGAGTCTGTCCATTGGACAGAAGA
TTGCCTTGGTGGAGAAGATCGTAGCCGTCCTGATTGACATGAAGTGCCCA
CACAGCCTGGAACCCCATCAAGTGCAGGGTCTGGAATTCTTGGCCATACA
TCCCGTCATCCAGTGGCTAGTTAAGACCTCTGTGGAAAACCGAGCGGAGC
GTGGGCAGCGCTTGAAGAGATTTGCCATCGGCCAGTTTCATAATCACTAT
CAGTACAAAAGCGACAAGGACAATCTCACTAAAATACGCCTGGCCTCCAC
AAACATTAAGGCTATACAGGATCTGTACGGCCCCAGGAGGCAGTACGAAC
GCCAAGAAGCTCCTGATGATGATGATGATGTGTCCAGGGTGCGTCTTACT
CTTTTAGAATACGGAGATCCAGGACCGACCTTTAGGAGCAGCGCTGAAAG
AAAGGCGGATCGGGGTCCTGGAGAAAAAGATGAGCTCGATCTGGAGGAGT
ATCTTCGCAGCTTATCTCTCATCAAAGATGACCCGACGGGCACTCAAAAG
CGCATTGATCTCGATCCTACAGCACGGCAAGAGCTTCAACAGCACTATGC
TGAATTCAAGCTGGAAATGGAGACGGATGCCCAAGAGTTGAAATCACAAA
ACCAACAAAACGTCTCGAGGCGGCCAAAATTGCTATGGAACATAAGATTA
GACGTTACTGCAGGAAAACGACAGCTGCAGATGCTGAAATGACAGAAAGA
AAAGACCAGGAGTGGAGGACCATGATACCTTAATACTGGAGCTCAAGCCA
CCAAGATACCAGATAGGCGATCAAGGCTCCTCGAAAATTAGAGGTTGCTG
CA
UFO08924.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:55:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fidipidine-RA | 1977 | CG7773-RA | 119..1216 | 8..1087 | 4960 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:54:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16263603..16263905 | 734..432 | 1515 | 100 | Minus |
| 2R | 25286936 | 2R | 16263257..16263538 | 1008..733 | 1110 | 97.9 | Minus |
| 2R | 25286936 | 2R | 16264153..16264364 | 301..90 | 1060 | 100 | Minus |
| 2R | 25286936 | 2R | 16263959..16264091 | 434..302 | 665 | 100 | Minus |
| 2R | 25286936 | 2R | 16264414..16264501 | 95..8 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:55:01 has no hits.
UFO08924.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:30 Download gff for
UFO08924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fidipidine-RA | 118..1143 | 3..1022 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:40 Download gff for
UFO08924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fidipidine-RA | 116..1141 | 3..1022 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:20 Download gff for
UFO08924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fidipidine-RA | 116..1141 | 3..1022 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:20 Download gff for
UFO08924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16263241..16263536 | 735..1022 | 97 | <- | Minus |
| 2R | 16263603..16263905 | 432..734 | 100 | <- | Minus |
| 2R | 16263962..16264091 | 302..431 | 100 | <- | Minus |
| 2R | 16264153..16264361 | 93..301 | 100 | <- | Minus |
| 2R | 16264417..16264504 | 3..92 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:40 Download gff for
UFO08924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12150746..12151041 | 735..1022 | 97 | <- | Minus |
| arm_2R | 12151108..12151410 | 432..734 | 100 | <- | Minus |
| arm_2R | 12151467..12151596 | 302..431 | 100 | <- | Minus |
| arm_2R | 12151658..12151866 | 93..301 | 100 | <- | Minus |
| arm_2R | 12151922..12152009 | 3..92 | 96 | | Minus |
