UFO08944.5prime Sequence
1133 bp (1032 high quality bases) assembled on 2011-08-10
> UFO08944.5prime
CAGTCGACATGGTTCGGAGAAGGGTACTGACTAATTCGGCCAAGCAGGCT
TCGATGAATGCCTATCAGCAGCTGTGGCAGCAGCAGCAATTCGCCCGAGC
TCCATTAGTTGCCGCTATGCCAGAATATTGGCATTCCGTGTGCAACAAAT
TTGGTGGCGCCATGCCGCGAATGGCGGTTTTAGCTCCGCCGGAAGTCAGT
AGCCGGAAATTGAGTCGTTTGCGAGGGCAGCTAATGAAATCCCAGCGAAA
AAGCGCTTCGATTCAGAGCTTCATACCAAACTACGGACTGCAGCAGCATC
CTCAAATGCAATTTCAAAGGGGCTATCAAAACGCCAGCAATGGATCCTAT
CCAAGTCGAAGTGTTTCTAAGGCAGCTCTGCTGACACCCGGTTGCATCTT
AGCTGCTTGTCAAAATCAAGGCTACGGTGGTGTTCCAGCAGTGGGAGTTG
CATCCGCGTCGCAGCAGCAACATCTTCAGTTGAATCAAGGAAATTTGTTC
AACTATCCGGGTGCAGTTAGTCCTTTGCAGTGGCAACAACAGCAGTATCA
AGTGCAGCAGCAACACAAGCAATTTCTACTGCAGCAGCAACAGCAGCTGA
AGGCAGCACCTGTTGGCATTCTGAAGAATTCTTCAAGAACTGGAGCTGGT
CAGCAGCTCAATGGGGATTACTTTGCTGCCAGTCCTCCTCCAAAAACGAA
GAAAGTGACAATCAGGAGCACATCTCCCACCCCCACCTCCACATATCAAA
AACCCATAGTGGGAGAAAATTAAACCTTTGCCTGATATTCCGCCAAAGCC
AAATAAGAAATCCAAACTAAATACACTGAGAAAAGAGCGTCAGCAACTAG
AGCAGTTGCAACTGCAACGTGAGCTACTCAAACAGCGAGAATCTATTCAG
AATCAAAGAAACATTGAAGCGAGGGCATCAAAACCAAAGGATTCGTGATC
AGAAACCCATCTGGAACCTAATACATGTGCAGCTTCAATTCGAAATTAGC
AGATCGTTTATAAAAGGCTCAGTGCGATCAGAATACAGAAGACCTCCATG
TTTACGCAGCATGCTAAAATCAGCCACTAATTCAGACTTGATAACCAAAT
TCATAACTTTTCCTATGAGCACCACTGAAAAAC
UFO08944.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:57:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG44433-RA | 2491 | CG44433-RA | 159..1290 | 8..1119 | 4975 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:57:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18685639..18686617 | 981..8 | 4605 | 99.2 | Minus |
Blast to na_te.dros performed 2014-11-26 23:57:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6784..6866 | 527..613 | 200 | 73.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6832..6914 | 527..610 | 165 | 67.9 | Plus |
UFO08944.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:47 Download gff for
UFO08944.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15086-RF | 151..1296 | 1..1125 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:03:36 Download gff for
UFO08944.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44433-RA | 151..1296 | 1..1125 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:10 Download gff for
UFO08944.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44433-RA | 151..1296 | 1..1125 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:10 Download gff for
UFO08944.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18685478..18686620 | 1..1125 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:03:36 Download gff for
UFO08944.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14572983..14574125 | 1..1125 | 96 | | Minus |
