UFO08946.5prime Sequence
1055 bp (1002 high quality bases) assembled on 2011-08-10
> UFO08946.5prime
CAGTCGACATGCGCTGGAAGCTTCAGTTTGTTTTATTCGCTATAATTCAA
ATAGTGAGGTCCCAGAATGGAGAAGATTCGGATTCAGATACGGAAGTGGA
AATGGATTCCGAGGTAGAATCGGGCCAGTTTTTTAGCCATTTGTACAAGA
GCAACTTGCAACAGTTGGTGAAAATTAAGAATGACTCAATGGATCCGTGT
GATGACTTCTATGCACATGCTTGTGGAAACTTCGATCAAACGAAGGAGGA
AAATTCCGATGATTTTCTTCCACCCTATCTGTATAACAAACAGGACAGAA
TGAACTTCTTCACAGCTGAGGTTGGAAATTTTGAAACTATACCAGGACGA
TTGATTTCTCAACTTTATACGGAATGCCGAAAGAGGGAAGAACGAAATGT
TTTCACCCCTACTCGATTGACTTCTCACTGGGAACGTATGCTCGATGAGA
TCCCATTCCTGGCCAGGCATAAAGAGGTGCTCTCTTCCTGGCCTTTCCTT
AAACATCAATGGGAGCGAAGGCGCCTTTATGGGCAGCTGAATTGGATAGT
TCTGTCAGCACAACTGGCAGCCCATGGCCTACCCACTTTACTTCATATCT
ACTTTGCCTTGGATACGATTTATGTGAGTCCCATGGAGGAGCTGCCCTGT
CCTAGTATCGCGGACTTTCAATCTAGCCTGTCTGATGTCTTGGAAGGTAG
ACATCATCAAGTATCCCGTATAATATCACATGAGATGAGGGTTCTGTGTC
GCGAAATGAGAGGAGAACTTCCGCTCGTAAGAAGTTTGAGCCAGAATACC
AGATCCAACACCTCCAGACCAGGTGAAGAACAGCTTCTTCTGGATGAAAA
CACCATGGATTATTTTCAGCAGTATTTTGCCGCACTTAACTTCTCCGAGG
ACCGGCTGGTGGAGCACGCAAGTTTCCTCTCGATGTCGAGAAGATCACTC
AAGGCCTGGGAAGTTCTCAGACATACGGAAACCTCGCATAGTGTACATCT
ATGTGATGTGGCAGGCCAGGAACAGCTTCAATACCGGATGCTATAGGTAC
TTGAA
UFO08946.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:56:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13283-RA | 2123 | CG13283-RA | 41..1081 | 9..1047 | 4990 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:56:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16836208..16837218 | 1020..9 | 4870 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:56:25 has no hits.
UFO08946.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:42 Download gff for
UFO08946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13283-RA | 41..1081 | 9..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:03:18 Download gff for
UFO08946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13283-RA | 41..1081 | 9..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:53 Download gff for
UFO08946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13283-RA | 41..1081 | 9..1047 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:53 Download gff for
UFO08946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16836178..16837218 | 9..1047 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:03:18 Download gff for
UFO08946.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16836178..16837218 | 9..1047 | 98 | | Minus |
