UFO08956.5prime Sequence
1111 bp (1022 high quality bases) assembled on 2011-08-10
> UFO08956.5prime
CAGTCGACATGGCATCTTGCAAGCCGCTTTCCGTAAAACTAAAACTCCCA
AATCGTGTCCAACCCGAGTTTATACCGCATCCCGGAATGGCGGGTCGTTA
TACCAATAAGTTGCATTACTTCAAGAAGCATTTGCTCGACGAGGCTCGCA
AGAAGAAGTATGCCTTGGACTTCTTGGAGCCCGTGGACACGGAGGCTCTG
ATGGTGCCCACATACTACACGGTTATCCATCGTCCCATGGATATCGGTAC
CATTGTGAAAAGAGTTCAGAACAACTACTATAAATCTGTCAATGAAGCGA
TTGCCGATTTCAAGCAAATTATTAGCAATTGCTTCCTATTCAATCGATCC
GGCGATGTCGTTTACCGCAAGGGCCAGATGCTGGAGAAGTTCTTTCACAA
GAAACTCCGAGGCATGCCGTCTGGTCCAGAGGTGCCCTGCAATAGGGATC
CCAAGGCGGTGGGCAGGCCTAGGACCAATGCTCCTAGTTCCGCGCAGACG
GAACGCAAGTGCCGGGAATTATTGAAGAAGTTGCAGAGCATCACCAATCA
GACAGATGCCATGACGCGCAATTTCTTCAGTAACAAGTGGGATTCGTTGC
AAAAGAAAGTTGATCGCCAGTACTTCAAGTCTGTCAATGAATTTTGCTTG
CATGTGGATGGCTGCTTTAGAAAGTACCACGAACCGGCTAAAATCCTCTA
CGAAAGAGTCTTTAATCAGCCGGCGGCTTGGTGTACTTCCATGAATGGAA
ACTCATCGCTGGAATCTGCTTTGAATGCCGCAGATCTAAATGAACTACTG
GCTGCCGCCAAGTTAACGGTAAATAGCTTGATGCAGTGCGTCCAAATGCC
CGGTTCCAGGGAACCTCTGACAGCCAAGAGTTTGGTGGAGACTTTCTGTG
ACACCTTAACAGATGATAAACAAAATGGAGGCAGTCAACGAAATTCTCAA
CCCATCATCTAGCAAACGACAGAGATGAGCCCGAGCAGGAAACGATTTGG
TCAAGCGAATTAGCCAGCTATGGAGTTGTAGTGGAATGAAATAGAAAACC
TCATGCCAGTAGCATGATCTCAATGATGAAGCATCGATGCTCAATGGGAA
CCTGACCGATC
UFO08956.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:57:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7229-RA | 2332 | CG7229-RA | 156..1266 | 8..1096 | 4990 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:57:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19260121..19261185 | 11..1060 | 4675 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:57:55 has no hits.
UFO08956.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:55 Download gff for
UFO08956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7229-RA | 145..1234 | 1..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:03:56 Download gff for
UFO08956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7229-RA | 150..1239 | 1..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:30 Download gff for
UFO08956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7229-RA | 150..1239 | 1..1072 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:30 Download gff for
UFO08956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19260112..19261201 | 1..1072 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:03:56 Download gff for
UFO08956.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15147617..15148706 | 1..1072 | 97 | | Plus |
