UFO08957.5prime Sequence
222 bp (185 high quality bases) assembled on 2011-08-10
> UFO08957.5prime
CAGTCGACATGCCTTGTTTTCTGTGCACTCAGACTGTGGATGATGCGGCG
GGCAATATAGAGTTTGCCTCGGAGGAAGCCGATTCACTTGGCCTGCGGTG
CATCATCGAGAAACACTTCTGGCTTCAGATCCCTGACTCAAAAGAGCCGG
CTATGTGTGCGGTACTGCTGGGAGCAGCTACTGCTCTTTAAACTTTACTC
AATGTGGAACAAGCCACAAGCG
UFO08957.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:58:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8388-RA | 1865 | CG8388-RA | 101..313 | 9..215 | 885 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:57:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16011219..16011338 | 128..9 | 600 | 100 | Minus |
| 2R | 25286936 | 2R | 16011093..16011160 | 189..124 | 210 | 94.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:58:00 has no hits.
UFO08957.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:56 Download gff for
UFO08957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8388-RA | 1..229 | 5..222 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:03:58 Download gff for
UFO08957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8388-RA | 96..322 | 1..222 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:31 Download gff for
UFO08957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8388-RA | 96..322 | 1..222 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:31 Download gff for
UFO08957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16011219..16011343 | 1..128 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:03:58 Download gff for
UFO08957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11898724..11898848 | 1..128 | 96 | | Minus |
