UFO08970.5prime Sequence
1145 bp (1029 high quality bases) assembled on 2011-08-10
> UFO08970.5prime
CAGTCGACATGGCATTATCACGCGCCAAGCCCGACGAACTGCCCAGGGAC
GCGGTGGTCATAACAGAGGATCAGGCCCTCAAATACCAATGGAAGATTAT
AACTTCCTGGGACAAAATAGGCGAAGTATGGTCGTTGCGCTACACGCCCG
GAATTCTGAGTGCTTTGGCTGCGGGAACGGGCGCCTACATAAATAATCAT
TATCGCACCAAGCTGCGACTTGGAGGACATGGTCGATTGTCCACTTACCT
CCCGATTGTCGCCGTTCCCGCCATATTTACCATGCTGGCGCACAAGTTCT
TTATTCAGCGGCCCATCCTACTAAATCCGCTGGGCGAGTGCCCGGTGTGC
ATCCAGATGCGCAGTGCTGCCTTTCAGACAAGTCTGGGCATCGTATATCC
CACAATTCTGGCCCCATTCGCCGCATTTCTGTTCGCAACCCGCTGCTACA
CGTACCGTATTCCCTCGATTACGGAAAATCCCAGAGAAGTGTTTCTGTTG
TGGCGGAAATTTACACGCCCCATTGTCCCAGCCTTAGGAACCTTAATCGG
CCTGCAGGCCCTGCTAACCATGTTCCTTACTGGCCAGGAGGACAAGCAGA
ACTTTAAACTTATGTTACGCATGAGGGAGATCGAGCACCAGGTGGAGGAG
GAACACTTGCCACAGCGAATGGACTTTGCAAGCTTTCTAGACCATTCGTT
TGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATC
ATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTC
TCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAG
ATGGAGTTCTGAGGTCATTACTGGATCTATCACAGGAGTCCAAGCGAGCT
CGATATCAAATTACGCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATT
CATTAGCATTCTGCCGACATGGAAGCCATCACAAACGCATGATGAACCTG
ATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTTTAAATATTTTGCCC
ATGGTGAACGGGGGCGAAAAGTTGTTCCAATTGTCACGTTAATCCAACTG
GTGGAACTCACAGAATGCTGAACAAAACATTTCTGATATACCCTT
UFO08970.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13392-RB | 922 | CG13392-RB | 101..769 | 9..677 | 3345 | 100 | Plus |
| CG13392-RA | 754 | CG13392-RA | 17..685 | 9..677 | 3345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:53:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8381974..8382523 | 677..128 | 2750 | 100 | Minus |
| 2L | 23513712 | 2L | 8382589..8382707 | 127..9 | 595 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:53:30 has no hits.
UFO08970.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:17 Download gff for
UFO08970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13392-RA | 17..690 | 9..685 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:01:56 Download gff for
UFO08970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13392-RA | 17..690 | 9..685 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:39 Download gff for
UFO08970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13392-RA | 17..690 | 9..685 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:39 Download gff for
UFO08970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8381969..8382523 | 128..685 | 99 | <- | Minus |
| 2L | 8382589..8382707 | 9..127 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:01:56 Download gff for
UFO08970.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8381969..8382523 | 128..685 | 99 | <- | Minus |
| arm_2L | 8382589..8382707 | 9..127 | 100 | | Minus |
