UFO08975.5prime Sequence
1075 bp (997 high quality bases) assembled on 2011-08-10
> UFO08975.5prime
CAGTCGACATGATTGGCGAGTTTGAGGACTTAGACATCTTTTATGACTGC
CGCAGTGACGACGAGGAGACTCCAGATCTGGAAGTGGGCGGTGGTGATGA
AGTGATCTGCAAGCAAGCGCCTCGATTTGACGATCCTGTCCAGATTCGGG
CCGTTTTGGAGCGGGCAGCCACTGCCACCCAGCGGTTGCTAAGGTGCTAC
GGAGGCACTGATTCCGTGCCAACTCGTCCTTTGATGACACTTTTCTATCC
GGCCACCCTGGAGGTCAGTGCCCGTCTACATACGGACGACAAGTGTCCTT
GCCCCAAGGACAGGCAGTGCAAGTTAATCGGCGACCCAGTGACCCTGAGG
CTGCCAATCGAACTGAATCCGGAAAGCGGCCAGGTCAAAGTCAACATCTT
CCAGCCCAAGTCAATTGGCACATTTTGTGGATGCAATGCACCTGGAAATC
AGAACAAGTCGAAGAGCAGAAGATCGAGTGTAAAGTGGTCCAACAAGGAT
GAAGTGTGTCCCGATTGCCAGGAACCTAATCAAAACACGGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCT
GAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGA
GTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCA
GTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAA
CGGCATGATGAACCTGATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCG
TATATATTTGCCCATGGTGAAACGGGGGCGAAGAGTTGTCATATTGTACG
TTTAATCAAACTGTGAACTCACCAGGATGCTGAGACGAAAACATATTCTC
ATAACCCTTAGAATAGCAGTTTCACCGGTACCGCCAATCTTGCATTATTG
TGTAGACTGCCGATTCGTCTGCATT
UFO08975.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:53:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33189-RA | 677 | CG33189-RA | 58..588 | 9..539 | 2655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:53:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8780202..8780732 | 539..9 | 2655 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:53:43 has no hits.
UFO08975.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:17:18 Download gff for
UFO08975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33189-RA | 52..595 | 2..548 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:04 Download gff for
UFO08975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33189-RA | 52..595 | 2..548 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:50:43 Download gff for
UFO08975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33189-RA | 52..595 | 2..548 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:50:43 Download gff for
UFO08975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8780194..8780738 | 2..548 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:04 Download gff for
UFO08975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4605916..4606460 | 2..548 | 98 | | Minus |
