UFO08980.5prime Sequence
1110 bp (1022 high quality bases) assembled on 2011-08-10
> UFO08980.5prime
CAGTCGACATGTTAATTCAACTGGTCTTCCTGGGCATCCTATTGTGGGCG
TCCTTCTTTTGGCTGCAGTGCCGCTACCTGGATGTCCTGGAACTCCTCTT
CGCCTGGATAGGCAATCAGTTGGCGGAAACTCGCAGGAGGCGAGCTCGCG
AAGAACGGTGCCGCCTGGGCAAAAAGTGGGCGGTCGGAAATAAGGGCGAT
GGCATGGAGAAGCTGCTCTCGCCGCCGATCAAGAATCGTCTCAATATCCG
AGTGGAGCAGTGCTGCGACTTCATAACCGCCGGCTTGGGCTTGGTGCTCG
AGGACGACGTGACCCAGAGGTTTGTGGCCCCACCTTCGCCAGCTGGGGAA
TGGAATCTGCTGACCCGCAACCTTCGTCAGAGGAATCGATACCTCAGCTG
GCGTTTAAGGACGGTCTGGCTGCTGGGCTGGGTTGTACGCTACGGACTGC
TTTTGCCCTTCAGGACCATTGGCTGCTGGCTGTGCCTGTTCATGATCAGT
GGAGTCTCAATGCTGCTGGGTCACATTCCCGACTGGTGCTTCAAGAAAAA
GTTGGTGGAGCTGGTATTGCGGCAGTGCTTCCGAATCACGGCCGCCTGCC
TGCCGATGATCCGCAGATTCCACAACACGGAGTATCGGCCCACCAAGGGC
ATCTGTGTGTGCAATCACACGAGCCCCTTAGACGTCCTGGTGCTGATGTG
CGATGCCAACTACTCGCTGACGGGCCAGGTTCACACCGGCATCCTGGGCG
TCCTGCAGCGCGCCCTGTCGAGGGTCTCCCACCACATGTGGTTCGACCGC
AAGGAACTGGCCGATCGTGAGGCTCTGGGTCTGGTGCTCCGCCTACACTG
CTCCATGAAGGATCGGCCGCCGGTCCTGCTCTTCCCCGAGGGCACTTGCA
TCACAACACCGCCGTAATGCAGTTCAAAAAGGGTAGCTTCGCGTCAGCGA
CGTCGTTCATCCAGGTGCCATTCGATACGATCGCGATCGCGGAGCCTATT
GGACAGCACCGTTACTCTATGCTCAAATACATGCTGATGGTTTAGCTCGT
GGGTGCATTTGCTGCATGTTTGGTAACCATGCCGCACTCCGACGGGTCAA
CGAACAAGAT
UFO08980.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:58:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15450-RA | 1490 | CG15450-RA | 140..1243 | 8..1103 | 5055 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:58:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20824291..20825367 | 8..1075 | 4805 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:58:29 has no hits.
UFO08980.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:01 Download gff for
UFO08980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15450-RA | 132..1235 | 1..1095 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:10 Download gff for
UFO08980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15450-RA | 132..1235 | 1..1095 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:39 Download gff for
UFO08980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15450-RA | 132..1235 | 1..1095 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:39 Download gff for
UFO08980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20824287..20825386 | 1..1095 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:10 Download gff for
UFO08980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20695314..20696413 | 1..1095 | 97 | | Plus |
