UFO08981.5prime Sequence
1143 bp (1026 high quality bases) assembled on 2011-08-10
> UFO08981.5prime
CAGTCGACATGACGATGAATCGCCACGAGCGTATCGAGTGCAAAGGATGC
GGAAAGCGGTCCCTCACCTTCAGGTGCTATCGCTGCCTGAGCTGCCAGGA
CTTTGATATTTGCGAGGAGTGCTATGACAATGACTTCACCACATCCACGC
ATCCGTTTGACCATCCGGTGGTATGTGTCCTCATTCCGGCAGATGTGGAA
CTGTACTTTGGTGGCGAGTACATCAGTAACTATCCGCCGCAGAGCTACCG
CTGTCCGTACTGCAAGAGATGGGGCTTCAACGAGTCCACCTTCCTGGAGC
ATGTATCGGCAATGCATCCGGATGCCAGTCCCCTGCTGGTCTCCACCATG
GTCGGTCTCTTCGAGCAGCAGCAGGCGGCACGTCTCTTTCTGGAGAATGA
GCAGTTGGCCTCCATTGCCGTGGCCGCCACATCGCGCAACGAACTGATGC
GTCGCCCAGAGGGCTCCATGGCCCTCTACTTGGAGCCGCTAAATCGGGAT
GGAAGCTATCGCAGGGTGGTGGAACGGAATAACGAAGATCGTTCGCGGCG
CTTGTCTCCGGATGGCCGTGATCGGCTTCAGGCTCTGGTCAGAGAGCGGT
ACTCCCGTATTGCACGCCGAAGTGCTGCCAGAGTTGGTAACATGACTTCC
AGACCGCTGCTAGCGCCTGCTCCCGGTGACGGCTCCCGCTTGAGTGGGAT
ACAGGAGAGCATAGAGGCAGGCCAGGGAATACGTAATGTCATTGTGGAAG
AGCTAAGCACCTCCAACTACGATCCTCCATTCACCATCAATGCCAGTGCC
AGTGCCATATTGGAGCAACAGCAGCAGCAGCAGGTGATGGGACCAAGCCC
AAATGCCGCCGCTCCACCTATCGTAACACACCCATCGCTGATCGAGATGA
TGCGCTTCTATGACGAGGCTGGCTTGCAGCCATTTCCAGCTTCATCCCGT
CGAGTCATCCGCACCAGGCACGCAAACCCAGCTCAGCGGCGGCTACATCG
GTAACAATAACCACGGGAGCATTAATGTTACGACCACATCCGCTTACCCA
GGCGTTCGCACAATACCTCGATCTGACCCGCCCCCGATTCTGTTTCGCTG
ACAGCGATTCGATTATAGCCGGAGCAGTTCCAGGCATCGGGAA
UFO08981.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:58:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15286-RB | 1814 | CG15286-RB | 162..1250 | 9..1095 | 5065 | 98.3 | Plus |
| CG15286-RA | 1841 | CG15286-RA | 162..1250 | 9..1095 | 5065 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:58:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14338401..14339377 | 9..985 | 4885 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:58:34 has no hits.
UFO08981.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:01 Download gff for
UFO08981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15286-RA | 162..1264 | 9..1106 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:12 Download gff for
UFO08981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15286-RA | 162..1264 | 9..1106 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:42 Download gff for
UFO08981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15286-RA | 162..1264 | 9..1106 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:42 Download gff for
UFO08981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14338401..14339503 | 9..1106 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:12 Download gff for
UFO08981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14338401..14339503 | 9..1106 | 98 | | Plus |
