UFO08987.5prime Sequence
1121 bp (1019 high quality bases) assembled on 2011-08-10
> UFO08987.5prime
CAGTCGACATGGCTGCGGCCACCAACAACGATTCCTCCGGCGTGGAGTCG
GCCAAGGAGGAGGTGGAGATGTCGATGCCGCCATCGCCCATGTCGATGGC
CATGGTACTGGCCAAATCGACACCGATGCCCATGCCCACCAGCGCCTCCA
AGGGGATCATGATAACGCCGCCGCCACCGGCAATGCCGCCCACGCCCACA
TCGTCGCCCAACACGCACGGCGAGTGGCCCCACATGAACATCAACCTCAA
CCTGAACATGAGTTCAAACCCCAGCACGAATGCATCATTCCAGCTGAGCA
GAGATCGGGGCGAGCACTTTGCCCTGCCGCATCTGCCGCCCCTGCCGCTG
AATCCAAATGCCTCCAATGCCGAGTATCTGCCCAGCCTGATTCATCCAAG
CACCCTGCCCTCGGGTAGCAAAAGCTTCAAGATGCGGCCGCGAATGCAGC
GTCTAAAGCACTCCTACAGCTACAGCAACATAATCGTCCAGTCAAATGGC
CGCAAACTGCGCACCGCCGCCTCCACCTGCAACATCGAGCTGCTCAACCG
CATCCTTGAGGGTGGGGCCAATCCAAATGCCGCCGACGAGTACAATCGTA
GTCCCCTGCATCTGGCCGCCTGTCGTGGCTACATACCCATTGTCCAGCAG
CTACTAAAGTACGGAGCGAACCCAAATGTAGTCGACTCGCTGGGGAATAC
CCCACTCCATCTGGCTGTGATTTCGGCCAGCTCCAATAACTTCAACGTTG
TGGTGGGTGTGCTGCTCCAGGGCGGCGCCAGTGTCCACATGTACGATCGC
AGCAACAAGTCACCGCTGGAGCTCGCCGAGGCCAAGCTAAGATTGCTGCG
CAATCGTTACGATCACCCTACGCCGGAGACGGCCAAAATCCTCGAGGACA
TGTGCATGCTGACCACGCTCATCTTACGCTACATGGTAAAGCAGCAGCGC
GAGCTGGAGATCTCTCGCGCTGGAGAGCGACTGCAGACTGAGCACAGCGA
TGACAGAGCAGTCGTATCCAGACGCGATGGAGCTGCTCGCAGTGTCGAGC
GGCTATCATCACACCAGCAGCCTTCCTAGAACATTTCGTTGCGCGGGCAG
GTAACGGTCTATCTAATCCTA
UFO08987.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:58:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10809-RB | 2233 | CG10809-RB | 401..1462 | 9..1058 | 4985 | 98.7 | Plus |
| CG10809-RA | 1966 | CG10809-RA | 339..1400 | 9..1058 | 4985 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:58:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9858508..9859489 | 987..9 | 4760 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:58:54 has no hits.
UFO08987.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:04 Download gff for
UFO08987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10809-RB | 397..1472 | 2..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:21 Download gff for
UFO08987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10809-RA | 335..1410 | 2..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:51 Download gff for
UFO08987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10809-RA | 335..1410 | 2..1069 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:51 Download gff for
UFO08987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9858418..9859493 | 2..1069 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:21 Download gff for
UFO08987.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9851518..9852593 | 2..1069 | 97 | | Minus |
