UFO08989.5prime Sequence
1113 bp (995 high quality bases) assembled on 2011-08-10
> UFO08989.5prime
CAGTCGACATGCTTCCCAACAGCTTTTACAGGATGAGGGACTTTGCCAAT
CCGAGAACAATGTTTAAAAGCTGTGCGAACAACAATGAATATCCCACACA
AGGTCCCCAAAAAGTGGAGTCACCAACTGATGTTACCCAGCCTGCTGCAG
CTCCTCAATCCACTGAAGATACTCAACCAGAAAAGACCCAAGAACCGATG
AATGATCCAAACAAAACGTCGCCATCAGAGCCCCAAAAACGTGGCAAGGG
GAACCGGAAGGGCAAGAAGAATCAAAAGAATGCGCCACGCACTCCCAGTC
AGACGAGCAAGAGCAGTCGAAGCAACAATCCGGGCAAAGATGGAAAGTCG
ACGGGAAATGATGACAATGAGAAGGGTAAAGGCCAAGGAAAACAGATGGT
CCAGCAGAAAGAAAATAGCCCTGAACAGGAGCAGTCGACTAGTGCACAAT
ATAGGAAGAATGTGCTCGACAAGGATCTGCAGGACAAGAAGTTAATCGAA
AAGAATATGCAGGGAAAGATAATCACACAAGAAAATCTTTTAGGGCAGAA
GGTCCTAATGCGGTTATCCGAGCAGAAGCTTTTGAGCTTGAGGCTCGAGC
CCAGGATTAAACAGAACACATGTCCACCGGCCAAAAAAGAAGATGCGGTG
GTCGCTTTTGACAATTCACTAGAATTTCTGTCACTGAACAATAAATGTGA
TGATGATCTGACCATCGCGGCGGAGAACGCCGAACTTTTGGAGGTCGAGG
ATCCTCAACATCCACTCAACAACTGCTGGACTCTGTGGTATCTAGAGAAC
GATCGAAATAAAAGTTGGGAAGAAATGCTGCACAAGGTTACAAGCTTCGA
TACCGTGAGAAGTTTTGGAGCCTGATCACTCACATCAAGCCCCCATCCGA
GCTTATGCTGGGCAGTGACTACTCCCTGTTCAGACGCATTCGACCCATGT
GGGAGGATGAGCCATGTCAATGAGACGCTGGGTCATCACTTGACCAGAGC
GCCAGATGGCTCTGGACAGTTTCTGGATGACGCATGCTCTTGTTCTGATT
GGAGAAAGGCCCTGTAGCACCTCGACGATCTTTTTGTTGCCTTGGTCGAT
TTCCCGCGGAAGT
UFO08989.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:59:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF4E-7-RA | 1638 | CG32859-RA | 131..1215 | 8..1083 | 4920 | 97.9 | Plus |
| eIF-4E-RI | 1793 | CG4035-RI | 1019..1212 | 776..964 | 290 | 79.2 | Plus |
| eIF-4E-RH | 1492 | CG4035-RH | 718..911 | 776..964 | 290 | 79.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:59:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1159074..1160106 | 1029..8 | 4665 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:59:03 has no hits.
UFO08989.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:05 Download gff for
UFO08989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF4E-7-RA | 125..1206 | 1..1074 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:25 Download gff for
UFO08989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF4E-7-RA | 124..1205 | 1..1074 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:54 Download gff for
UFO08989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF4E-7-RA | 124..1205 | 1..1074 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:54 Download gff for
UFO08989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1159032..1160112 | 1..1074 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:25 Download gff for
UFO08989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1053065..1054145 | 1..1074 | 97 | | Minus |
