UFO08993.5prime Sequence
1138 bp (1041 high quality bases) assembled on 2011-08-10
> UFO08993.5prime
CAGTCGACATGTCGAATCTGTACACCGAATTGAAGAACGAGTGGAGCAAA
CATGCGCCCAACCTCACCCACTGCTCCCGCCTCCTGGATGGCTTCAAACT
GGAGCTGGTGAGGTCCAACTTTGGAACAATCCAAACTGCATCGAGTTCCA
AGCAAAAGGATCAGCTAATCAAATCGCGGGAGATGCTGGAAATCGCCGTG
GAACATAGCATCACCATCAAGGATTATGCTGCCTTCGAGAGATATATGGC
CCAGTTGAATACCTACTACTATGATTACGATAAGTACTTGGAATCATCGA
AGCACATGTACAAGTTCATGGGCCTAAATCTGCTATATATGTTGGCCACG
AATCGCCTTGCCGACTTCCACATCGAACTGGAACGTTTACCGACGGCTTT
GCTGCTCCATGATAGCTTCATCCAACCCGTTTTGGCTTTGGAGAACTACT
ACATGGAGGGCAGATACAACAAGATACTGCAAGCCAAGAAATCTATGCCC
TCGGAGATCTATTCGAATTTTATGGACATCCTGGTGAACACGGCGCGTGA
GGAGATCGCATCCTGCATGGAGAAATCCTATCTGAAGATGGCGCCCAAAC
TAGCTGCTCAGCGTTTGGGCCTTCGTCCCGGTTCCAAGGAGCTTTTCGAG
CTGGCGACTAAGCGCCAGTGGTGTCTGGACGAGGAGGGGAACTACGACTA
TGCTGGACTTCATACCAGACCCATGGAGAAGGTCCCTGCCAAGGACATCG
CCACGCATAATCTCACTTATGCCCAAGAGCTGGAGAAAATAGTTGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGGATTCTCACCAATAAAAACGCCCGGCGGCACCGAGCGT
TCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCACAG
GAGTCCAAGCGAGCTCGATTATCAATTACGCCCCGCCCTGCCACTCTTCG
CAGTACTTTTTGTTATTCATTAGCATTCTGGCCGGAACATGGGAGGCCAT
TCAAACGGCATGTTGACTGATTCGCCACGGCATCAGGA
UFO08993.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:59:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rpn12R-RA | 940 | CG11552-RA | 66..852 | 8..794 | 3755 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:59:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15041719..15042505 | 794..8 | 3755 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:59:17 has no hits.
UFO08993.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:08 Download gff for
UFO08993.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rpn12R-RA | 59..862 | 1..805 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:32 Download gff for
UFO08993.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rpn12R-RA | 59..862 | 1..805 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:00 Download gff for
UFO08993.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rpn12R-RA | 59..862 | 1..805 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:00 Download gff for
UFO08993.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15041709..15042512 | 1..805 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:32 Download gff for
UFO08993.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15034809..15035612 | 1..805 | 97 | | Minus |