UFO08995.5prime Sequence
1114 bp (1021 high quality bases) assembled on 2011-08-10
> UFO08995.5prime
CAGTCGACATGATTGCCAAGCTAAAGCAGGAATATGCGGAGCGCTGGCAT
TATCCTCCAATTGTGCCGCCAGCCAAGCTTCGATATGTTGCATGTGGAAA
GGTAGCATTCTACGGCCACAACGATAAGCCGAAATACAAGCCCTGCTGGC
AGCATCCGCTCAATGTGCAGGATCAAACCCGCTTTGGAGTTTGCTGGGAG
TATCCGCCGGAGCGGTACAAGCGTCGTCCGCTTCCGCCACCGTGCCGGGG
ATCGACCATTCCCATCCATTTGCTGAAGCCAACCTTCAAGCATTGTGAGA
ATATCTACTCCCGCTACGATTTTAAGCTTGAGCAGTGTGTGCACGAGCAA
ACTCTAGTAGTTGACCAGAAAATGAAGGCCCTGAAGAATGAGCTGGAGCA
GGCCAAACCATTTCAGATTGAGAGGGTTAAGGAGATGCGTTATCATGGAG
TGCGTTATCGCATTTTAGCCAGCTCGACCGGATGCACTAAGACCTATCCC
GAGTACATAAGCCGGATGACCGAAGAGCGGGCCCTTTGCGAGTTTCAGAG
AGCCTACAATATCGTCAATCAGTCAAACACCGATTTGAGCAATTTATACC
TGGACATGAGTGAGTCAAAAAAGGAGCTAGATCAACGCGTAGCCAGGTTG
GACCGGTCTTTAGGAAGTACATTCTTGAAAGAGCTAGATTCGGTGCTGCA
AATAATCGAGGACTTAAACACGTATTTTTTTGGCGTGATCGTGAAGCTAA
AGACGTGGGCGGAGCTGATGGACCCTATGAAAGAGCACTCTATAGAGGAC
TATCTGGGGCTATTGAGTCACGAAACAGACTTCCGGACTTTCATGAGTGC
CGGCATGGAAAACTGCACCTGCAAGCGTTGCGACAAGAAGATCCCTTGAA
GCCGTACCTTCCGTGCTGGTGTCAAATGGAATCTAGCGAGGATGTTACAA
ATCTTAAGAATTTTGACGACGATTGTCCAAAGAACATAGCTGGCATCCCG
CACCACGAAAGTGAAATTGTGACACTACTGACACCCTCCTTGTTAGTGAG
GGCCGCGAAGAAAGCAGCTTGGCGATGAAATACAGCGGAGCAGCTTTCTA
GAACAATTCGTTTG
UFO08995.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:58:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13843-RA | 1183 | CG13843-RA | 54..1103 | 9..1057 | 4970 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:58:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22609538..22610106 | 9..577 | 2830 | 99.8 | Plus |
| 3R | 32079331 | 3R | 22610155..22610635 | 578..1057 | 2065 | 96.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:58:45 has no hits.
UFO08995.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:03 Download gff for
UFO08995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13843-RA | 47..1112 | 1..1067 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:16 Download gff for
UFO08995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13843-RA | 47..1112 | 1..1067 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:47 Download gff for
UFO08995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13843-RA | 47..1112 | 1..1067 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:47 Download gff for
UFO08995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22609531..22610106 | 1..577 | 99 | -> | Plus |
| 3R | 22610155..22610638 | 578..1060 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:16 Download gff for
UFO08995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18435253..18435828 | 1..577 | 99 | -> | Plus |
| arm_3R | 18435877..18436360 | 578..1060 | 96 | -> | Plus |
