UFO09004.5prime Sequence
1096 bp (1013 high quality bases) assembled on 2011-08-10
> UFO09004.5prime
CAGTCGACATGGAGGAAATCAAGAAGTTTGACAAGCTTGCCTTCCTGGAA
AGCTACCTGCTGAAGCACAAGGAATTGGGCAAGCGACAGCGCGAGTACAA
GAAGATCCTGTCCAGCAAACTCAAGACCCGCAAGGAGACCATCATCGAGG
CCAGCTTTGAGACGGCCATCGATCAGCTGGAGGAGGAGAAAAACGATCTG
CGTGCCCAGATCTGGGTGGCCAGTGGTACGACCCACAAAAAACAGAACAA
TCGCTGGCTGGAGCTGATTCGCTGCCATGTCGAGTGCCAGGAGAATCTGT
CGCAGGACATTAACTCTCTGAAGACATCGATTTCCAACATGGAGAAGGAG
ATAAGTCGCATGTCCAAGCAAATATACAACCTGAATCGTTTAACCATTCC
GGATCAGCAACATCAGGCCTATGTAATGCGAGCACGGAAAAGGATGACCA
TTTTGGAGAATTCCCTGGAGGTGGGAGTGCGTCAGGAGTGCGGTTTTACG
GCAGCCAATGCGGATCTGCGAGAGCAGCTTATCCGCATCCTGAATCATCG
CACCTTCTTCAATGATTCATACACCAAAATGGTGCAGAAGCTGAACAGCG
AGAAAAAGTATCTCATAGATCTGATCGAATACGCTCTGAATACCTTCGAT
GGCTGCATTGAGGTGTACGAGAAAATTGATTTGTTGGCCAAAAGGGAGGC
CAAGGAGCGCGATATGAGACGTGTGGAGATGCAGGGTATTATGCGAAAGG
TGGCAGCCGATGGTGATAACACCGCCTTCCTGAATTGCAAGTCTAAGCCT
CGAGAGCTGGCCGATTTGCAGCCCAAGGAGTACAAGCGAAGGATGAATTC
CGACGGGTGCACAACAAAAGATCAATCTCTACAACTCGGTGCTGCAGAGA
TTCTCCAGTATACGGAATCTAGCATATGGACGAGGTGATCGATAGTTTCA
GCAGCAGAGAGTCTCTATTACTCGTTCTCACTATGCACGAATGAGCTACC
ACATACTATGCTGATATCGTGATCCGCCTGTTGGAGGATATAGTACTGAA
AAGATACTCCACCCCGCCTGCAGAACACTGATCGATTCAGTTGGAA
UFO09004.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:49:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17083-RA | 1959 | CG17083-RA | 159..1211 | 8..1044 | 4840 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:49:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23286917..23287893 | 978..8 | 4585 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:49:14 has no hits.
UFO09004.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:40 Download gff for
UFO09004.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17083-RA | 152..1222 | 1..1052 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:57:25 Download gff for
UFO09004.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17083-RA | 152..1222 | 1..1052 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:48:59 Download gff for
UFO09004.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17083-RA | 152..1222 | 1..1052 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:59 Download gff for
UFO09004.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23286830..23287900 | 1..1052 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:57:25 Download gff for
UFO09004.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19112552..19113622 | 1..1052 | 97 | | Minus |
