UFO09005.5prime Sequence
1108 bp (1025 high quality bases) assembled on 2011-08-10
> UFO09005.5prime
CAGTCGACATGTTGTCCCACGCCTTCAACATGCATCCGCAGAGGCGTGTG
CCCGTCATCCATGAGCAGATCGCAAAGCAGTGCGCCCTGAACATTGTGCG
CGTGGCCTCCGCCATGCCGCAACCGCAGCCCCGCTGCCCATCCGGTCATG
TGGTCGTGCTCGTGGAGCTGCGCCGGACGGACGAGCAGACCGTGCACCGC
TACCAGGTGAATGTGCCGCCAACGGGCTGGACCAACGAAGATTTGGAGGA
GGAGGAAAAGCGATTCCAGCAATTGGTGCTCCCCGGTACACTGGACAGTA
TGGGCCTTAAGCTGCCTCTGCCAGAGCGTCCTCCGTGTCCAATGCATGGG
CGTTCCATCATGGAGATGGGCTGGTCACCGAACTCCAACATGGGTCCGCC
TCCTATGCTGATGATTCAGTCTTCGGTACACATCACCAACGGGCAGGATG
GCGCCACTGACTTCGCCACCTTCAGAGAGCCCGTTGTGACTAGTGAATCA
CCGGATAATTTGAGAGCGCACTTTATGGCCAGTCTATATCAGCAGCAACC
AAGTCCGCTGAGCTACTCGGACATCTGGGTATCAGATAGTCCATCGACGG
GCTTGCCCAGAAGTGAAGCCCTCTCCACGACCCATTTTCCGCAGTTTTAT
CTGGGCGAGAACGCCGAGTCTATGGTCGCTAATAAGATACGACCTATCAA
TGGTTATCCTATCAATGGTTATCCTATCAGTGGTTATCCGACAGTTCCGA
GACCAGCTGTGAAAAAGCCTCGTCACGTCGCCGAACTTTGCTTGGACAGC
AATGGAGAGTATGTGCTCAACAAGCAGCTGCATCAACCGTTGATTAGCCG
TCAACCCGATCCGATCATTCCCAGTGTCTCGAGCAGGGATCCACACTACT
TCATACAAATCAAAGCCACCAGTTGGAGTCCGCCATTAAGGACTCAATGG
CTACACGAACGTCGCCCAGAGTCTGAGAAGCCAAAATGATACATATCAGC
CCGCGGCCTTTGCAGATCACGATTGTTCTTGCACAAGCTGGACAGGACAG
TACAGGCCGCAGAGCATTCCGGAATCTCCATCACCTTGCAGAGTCTGGTG
GCCATGGT
UFO09005.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:49:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17098-RA | 2737 | CG17098-RA | 500..1521 | 6..1019 | 4915 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:49:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10652112..10653133 | 6..1019 | 4805 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:49:18 has no hits.
UFO09005.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:40 Download gff for
UFO09005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17098-RA | 132..1171 | 1..1033 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:57:53 Download gff for
UFO09005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17098-RA | 497..1536 | 1..1033 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:01 Download gff for
UFO09005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17098-RA | 497..1536 | 1..1033 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:01 Download gff for
UFO09005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10652109..10653148 | 1..1033 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:57:53 Download gff for
UFO09005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10652109..10653148 | 1..1033 | 98 | | Plus |
