UFO09016.5prime Sequence
1095 bp (984 high quality bases) assembled on 2011-08-10
> UFO09016.5prime
CAGTCGACATGCATCAGAATATATGGAGCGCGCCGCAGGTGGGTGGTTCT
GGTGGCGCTTTGAAGGCCTTGGCCAGGAATGTGGCCAATCATCTGAAGCT
GAACCGCAGCAATATGAAACGAGTGGTGGCCCAGGTGGTCGCCGAGCACC
ATACCCTCGGGGAGGTGGCCGACTACAAGGGTCACATGTACTTTGCCAAG
CCGGATCGCTTGAATTTTCACGAGCTGATTGCCCAGTCCAAGGAGGCCTT
CGATGATCTGTTGCTCCACGAACCGCGATCTGTGAAAAAGCAAGCAATCA
CGAAACGTTCCAAGCATCCGACCAATCCCAACGTTAAACTACAGATGACA
GTATCACCACCGCAATTAGAAAAACCACAAAAGAAACAATTAACTTTTAA
AAAGTCTGGTCTACCGAAAAAACATTCAAGGCCAAAAATTCGGAGTCGGA
AGAAGAGTTCCACCACCATTTTTCAGCTGGCGGATGCAGGTCGTCGTAGT
CTAAATGGTGTAATCATTGACGAAACTCATTTGCCCCTAGATGGTGAGCA
AAGGGAGATCCTTTTGCATGTGCCACCGTCGCTAGTCAAGCGGTCCCGAA
GGCGTCTCCGATCTGCCCAGATCAAGAATACATCGGAGAAATGCCCACCG
CAGAAACCGGATAAGGATCCCGATCAGAAGAAGACAGGATCACAACAGAA
AGGATGGCGAGAAATTCACCGAGGAGAAGATTCTTCAAGTTCAAAAGCGT
CAACCCGAGAAGAAACGCAGCGAAGAACCGAAACCAGTAAAGAAAATTCA
GAAAACCACCAGAAAGAGCTGATTCGGTCACCTTCTCGCCCCCGATCGGG
GTCCCCTTCGGTTCCTCAGACCCGACGGTCTCCTTCACCAGTTCGTTCAC
AAAACTGACATCTGTTCAGAAAAGCGAGCCAAGCTCTTCGCCTCACCACC
CCACAAGAAATTTAAATGTCCAGAATCCACGCATCAGTCGGGAGACACCT
AAAATGCCACCTTCCAGTCTTCGAAAAGATCAAATCGGAGATCGATTGCT
AAGAACAGTTCAAGAAAACTTCCATTGCCGCAAAGAGCTACGACA
UFO09016.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:50:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11369-RA | 2478 | CG11369-RA | 309..1395 | 9..1095 | 4980 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:50:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7574598..7575674 | 9..1086 | 4640 | 97.6 | Plus |
Blast to na_te.dros performed 2014-11-26 23:50:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6746..6864 | 285..403 | 117 | 57.5 | Plus |
UFO09016.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:48 Download gff for
UFO09016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11369-RA | 304..1394 | 1..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:20 Download gff for
UFO09016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11369-RA | 304..1394 | 1..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:18 Download gff for
UFO09016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11369-RA | 304..1394 | 1..1094 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:18 Download gff for
UFO09016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7574593..7575683 | 1..1094 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:20 Download gff for
UFO09016.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7468626..7469716 | 1..1094 | 97 | | Plus |
