UFO09017.5prime Sequence
1101 bp (997 high quality bases) assembled on 2011-08-10
> UFO09017.5prime
CAGTCGACATGTCTACCCTGGCCAATGGTGGAAAGGAGGAGGATCTAAAA
ATTCTGGCTCAGCTGAAGAGCATCGAACAGATCAACGAGCAGCGCCGCAT
ATTTCTCAACAGCACGATCAATGAGGAGGTGCCGGAGGCCACAAACGGAT
CGACGGTTCGGGAGGAGGACCTGGAGAAGAATCTGAAGGCCATAGACGAG
CCGCAGTCTACGAAGATGCCCCCGGAGGAGGTGGCGAAGAAAACGCCTGA
TGAGGTCCCAGCCCAGGAGCAGCAGAAGGAACCCGAAAAGGTGGAGCCAG
CCAAACCAGTGCCCCCCAACACGCTCACCCTGAACGTGAAATACGCCACG
CTGCCAAGTCCGAATGTGGTGACCCTGCGATCCCCACTTTCGCCGCCCCC
TAAGCCGCCAATGCTGGGCCGCACCCGCAGTACAGGTCCCGCCGATGGCA
AGGGTCCAGCGAGCAATGGAGCTCTCTCGCCGGACAGCTCCATAATCCGT
CAGAGCTTTCCCGAAGGCGTCATCACGCCCAGCAAGCCGGAAAAGAGCCC
TGCCACGCCCAGCGAGGAAGGCCCGCCGACCGTCTCCGCCCGCCACTACG
AGGGACTGATCGAGGAGCTGAGGTGTCCCGGCTGTGCCGGCGCCATGAAG
GCGCCCATCCTTCTGTGCAAGAGTGGCCACAGTGTCTGTGAACAGTGCAC
CCGCATTTTGCTCATGTGCCCGCTCTGCAAGGAACCCTTCACCAACTCCC
GATCGCTGACCGTGGAGGCGCTGTGCGCCAAGGCGCACTTCCGGTGCGGA
CACGCCTCCGGCGGCTGCCAGGTGCGGATGCCGGTCGTCCTGCTGCCGTG
GCACGAACAGCAGTGCATGTACAGCCGATGAAGTGCTTCATGGGCCGAGT
GTGGGGCGATTGCCGCTGGCAGGGGCGCGAGGTGCAGTGCAAAGAGCATC
TGGAGGAGCAGCACGACGACCGCCTGTTTCGTCAGCAGCGCTGATCTGGA
TGGATCTAGCACGCGGCGGAACCGTACCGGGCTACTATGTCTTCAGGCGC
CACGACGAATGTCACTTCTACGAATCACGGACGCCAAGCGTGTGGCTGTA
C
UFO09017.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:50:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2681-RA | 2283 | CG2681-RA | 281..1378 | 9..1094 | 5025 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:50:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2708964..2709687 | 9..732 | 3620 | 100 | Plus |
| X | 23542271 | X | 2710318..2710591 | 730..1000 | 1210 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:50:13 has no hits.
UFO09017.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:48 Download gff for
UFO09017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2681-RA | 281..1364 | 9..1079 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:22 Download gff for
UFO09017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2681-RA | 281..1364 | 9..1079 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:21 Download gff for
UFO09017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2681-RA | 281..1364 | 9..1079 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:21 Download gff for
UFO09017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2710320..2710680 | 732..1079 | 95 | | Plus |
| X | 2708964..2709686 | 9..731 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:22 Download gff for
UFO09017.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2602997..2603719 | 9..731 | 100 | -> | Plus |
| arm_X | 2604353..2604713 | 732..1079 | 95 | | Plus |
