UFO09021.5prime Sequence
1121 bp (1024 high quality bases) assembled on 2011-08-10
> UFO09021.5prime
CAGTCGACATGAACTTCCAGATGGCCGAAACGATCAGTACAGCGGCCAGC
GGCATGGAGTTGGCCCTAAAAGACCCCAGTCCAACGGTGGGTGGCGGCAT
CATTGTGGACATGACGCCCACCACGGCGGCGCTGCTGCATCACAACGCTA
TGGCGCTGCGCAGCCTCAAGGATGCCGCCTCATCCGCCTCCGAATCAGAG
CTACAGGAACCGCGATCACCGACACCCACGCCCACGAATCTCAGCACCGG
CCCCCACTCGCCGCCAATGACCTTCCGCTGCGAGCGTTGCGACAGTTTCG
AGACCAGCTCGCGGGCATCCCTGCTGCTCCATGTCGTCCAGTGTCTGGCT
GGTCAGGCGGCGGCGGCGGCAGCAGCGGCGGCGGCATCGGCCCGCCTGAA
GAGTGAGGATCTGCAGGAGCCGGAGAACATGAGCTTGGGTCACATGGAGG
GCGGCAAGGGCGATGGCCAGACGGGCAATGGTTCCAGCTCCTCGGCTAGC
TCCTCTCCGGCCGGGAATAGCGGAGGAGGAGGCGGTGGCAACAGCAGTTC
GCGCAAGGTCTTCGAGTGCGATGTGTGCAACATGAAGTTCTCCAACGGCG
CCAACATGCGCCGCCACAAGATGCGACACACTGGTGTCAAGCCCTACGAG
TGCCGGGTGTGCCAGAAGAGATTCTTCCGCAAGGATCACCTGGCGGAGCA
CTTCACGACGCACACCAAGACGCTGCCCTATCACTGTCCGATCTGCAATC
GTGGCTTCCAGCGCCAGATAGCTATGCGCGCCCACTTCCAGAACGAACAT
GTTGGCCAGCATGATCTGGTGAAGACGTGTCCGCTTTGCAGCTACCGAGC
GGGGTCCATGAAGTCGCTGAGGATTCATTTCTTCACCGTCACGGCATCGA
TCTGGATACCCGGACCGGGTGGCACTCTTCGTTGCTCCTGGCCTGATCAC
AGCTTCGGCGGCGCAGCAGCGCGCAGCTAGTTACGTGCCACTGACTTAGT
CCGGTGCCCGTGCATCTCAGTCCCAGCAGCAGCCAGCAGCACAGTTGCTT
CCTCGCCTAGCGATGCGGCGAGTCATGGCATTCTGAAATTGCACGCCCCA
TGACTCTAGCCATGGGATTCG
UFO09021.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:50:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12769-RA | 3863 | CG12769-RA | 1209..2290 | 9..1074 | 4915 | 98 | Plus |
| CG12769-RC | 4740 | CG12769-RC | 314..1385 | 19..1074 | 4865 | 97.9 | Plus |
| CG12769-RB | 4707 | CG12769-RB | 314..1385 | 19..1074 | 4865 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:50:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8056305..8057343 | 1033..9 | 4595 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:50:27 has no hits.
UFO09021.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:50 Download gff for
UFO09021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12769-RA | 1209..2268 | 9..1054 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:29 Download gff for
UFO09021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12769-RA | 1209..2268 | 9..1054 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:29 Download gff for
UFO09021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12769-RA | 1209..2268 | 9..1054 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:29 Download gff for
UFO09021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8056284..8057343 | 9..1054 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:29 Download gff for
UFO09021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3943789..3944848 | 9..1054 | 98 | | Minus |
