UFO09030.5prime Sequence
1137 bp (1027 high quality bases) assembled on 2011-08-10
> UFO09030.5prime
CAGTCGACATGCTTTACCTCGAAGACTATCTGGAGATGATCGAGCACCTG
CCGCAGGAGCTGCGCGACCGCTTTACCGAGATGCGCGAACTAGATCTCGC
CGTCCAGAACAACATGGACTCGCTGGACAAGAAGGCCCACATGTTCTTCA
AGCAGTGCAAGCGCGACGAACTGCAGCACGAGTCGATGGACACGGAGTTC
CACAGCCTGCGCGGCGAGTACTTCAAGGTGATGGAGGACGCCGACGAGAA
GGTGGCTATTGCCACTCAGATACACGAGCTGGTGGAGCGCTACTTGCGCC
GCCTGGATAGCGAGCTCTTCAAGTTCAAGTGCGAGCTGGAGGCGGACAAC
AACGGCATCACCGAAATCCTCGAGCGCCGCTCTCTGGAGCTGGACGGCAA
CTCCACTGCAGCCACCGCCCTGCTGCTGAGCATGAACCAGAAGGAGAACC
GCTACTACGGCGCCAGTTCGGCCAATACCATGGTGAACAGCTCGACGGGA
CACGCAACGGGTGCCGCCACTGGCTCCTCCGGCATTGCACTGGTCAGTGG
TGCTGCCGGAACGGGCGGTGCCCTCTCCAGCATCTCCACCGCCCAGTTGG
GCTCAAGTCAGCGCCACCGCAAGCTGGAGAAGCGGCGGGAAACCATATGC
ACGGTGCCTGTTCAGGAGAAGCGCGCCAATCTGAATCACTCACTTCCCGT
GGTCGGTTCGGGCTCCACGACTGCCGCGGCAGCCTCATCTTCGTCCGCCA
CAACGGCCGCAGCAGCCGCCAGCCTGGCCAGCGCGACGACTGCCCAAACT
CATGTCTCCAACCACATTGGCAGCATCGCCGCCACTCATCTCACCCTGCC
TGTGGCCATGGGCGTGGCCGGCGGCAGTAGCAGTCTTGCCAGCAGCTCGC
TTGCCACAGGAACGGGTTCGCTGGTCCGCCAACTGCCCACGAACCTTACC
CACACCGTGCTAAGCCACCTCGGGTGAGCGACCGCGCAGCGGCAGCGGGC
GGCACTCCACCGTCGGTGGTCGCTGCTGTACGCCCACGGGCAACGCCATG
TCAGTGACCTCGCCGGCGGGGCCACAGTCACCTACACCTGCCAACACTGT
GCCCGGAGGACCGCCGCCATCTATGGTCCAATTGCGG
UFO09030.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:51:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ing3-RA | 2298 | CG6632-RA | 128..1248 | 8..1123 | 5115 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:50:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18651804..18652787 | 1086..109 | 4400 | 97.9 | Minus |
| X | 23542271 | X | 18652864..18652964 | 108..8 | 505 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:51:01 has no hits.
UFO09030.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:55 Download gff for
UFO09030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ing3-RA | 119..1229 | 1..1102 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:43 Download gff for
UFO09030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ing3-RA | 119..1229 | 1..1102 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:39 Download gff for
UFO09030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ing3-RA | 119..1229 | 1..1102 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:39 Download gff for
UFO09030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18652864..18652967 | 1..108 | 96 | | Minus |
| X | 18651787..18652787 | 109..1102 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:43 Download gff for
UFO09030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18545820..18546820 | 109..1102 | 98 | <- | Minus |
| arm_X | 18546897..18547000 | 1..108 | 96 | | Minus |
