UFO09031.5prime Sequence
1135 bp (1029 high quality bases) assembled on 2011-08-10
> UFO09031.5prime
CAGTCGACATGAGGGGTGTTCTCAAGTGGCTGGAACGCATAGAGTTTCCC
AATAGCAAAGACAATGAGATCAGTGTCCACAATGTGTGCTACGCACCCGA
TGGCAGCCAATTGGTGGTGGCTGCGGGGGATCGGTTGCTCATCTACGATC
CAAACGATGGCTCCTTGCTGAACACCTTGAAGGCGCACAAGGATACGGTC
AATTGTGTGGCCTACTCGCGGGATGGCAAGCGGTTCGCCAGCGGAGCCTC
CGATAAAATGGTCATCGTGTGGTCACCTCAGCTTGAGGGACTGCTCAAGT
ATTCGCACGGTGACTCCATACAGTGCATGAGCTTCAATCCTGTTTCGCAC
CACCTGGCCTCGTGCTCCTTGTCGGATTTTGCCTTTTGGTCGGCTGATCA
GAAGGCGGTGCAAAAGTACAAGATATCCGCGCGTGTCAATGGCTGCTCGT
GGACCAATGATGGACAGTACCTGATCCTGGGCCTGGCCAATGGCACCATA
TCCATTAGGAACAAGTTGGGCGAGGAGAAGGGGAGAATCGATCGGCCTGG
TGGGCCCAACAGCAACGTCTTCAGTGTCCAATGTTGTCCGGCCAGCGGTC
CTGGCAGTGTGGACACCATCGGTGTGGTGGACTGGAGCCAAACGCTATCC
TTTCACACTCTGAGCGGCCAGATGATTGGCAAGGAGCGAACCCTGGGCTT
TGATCCCTTGTGCCTGCAGTACTTTCCCAATGGGGAGTTCTGCCTGGTGG
GCGGCTGCACTGGAGGTCTACACTTCTTCACCAGGGAGGGCATTCGGCTG
GGTACGTTGGGCGATACCTTTGACACCTGGATCTGGACAGTTGCCCTACA
TCCCAATGGTCAATCCTACACCATTGGGTGTCAAGATGGAACCCTGGCCT
GCTTCAACATTGCGTCTAGTACCGTGCATGCCCTCTACCGCGAGCGCTAT
GCCTTCCGGGAAAACATGTGCGACGTGATCATTCAGCACTGATCTCCTGC
CAAAGTGCGCATCAGTGTCGAGAATTAGTTCAGAAATAGCCATTATCGGG
ATCGACTGGCGTCGTGGCGAAACGGTGTTCTCTTGGCCTGAGCCTGAAGA
TCACCATGCCTATAATGCGGAGATTCGCAACTGTC
UFO09031.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:51:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Oseg1-RB | 4766 | CG7161-RB | 1154..2212 | 9..1061 | 5095 | 99.1 | Plus |
Oseg1-RA | 3714 | CG7161-RA | 102..1160 | 9..1061 | 5095 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:51:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8410281..8411043 | 1061..305 | 3490 | 98.7 | Minus |
3L | 28110227 | 3L | 8411114..8411348 | 305..71 | 1175 | 100 | Minus |
3L | 28110227 | 3L | 8411429..8411493 | 73..9 | 325 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:51:05 has no hits.
UFO09031.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:16:56 Download gff for
UFO09031.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Oseg1-RA | 75..1143 | 1..1065 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:45 Download gff for
UFO09031.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Oseg1-RA | 94..1162 | 1..1065 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:42 Download gff for
UFO09031.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Oseg1-RA | 94..1162 | 1..1065 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:42 Download gff for
UFO09031.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8410284..8411043 | 305..1058 | 98 | <- | Minus |
3L | 8411115..8411345 | 74..304 | 100 | <- | Minus |
3L | 8411429..8411498 | 1..73 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:45 Download gff for
UFO09031.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8403384..8404143 | 305..1058 | 98 | <- | Minus |
arm_3L | 8404215..8404445 | 74..304 | 100 | <- | Minus |
arm_3L | 8404529..8404598 | 1..73 | 94 | | Minus |